Rhodoferax koreensis: RD110_20815
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Entry
RD110_20815 CDS
T04721
Name
(GenBank) A/G-specific adenine glycosylase
KO
K03575
A/G-specific adenine glycosylase [EC:
3.2.2.31
]
Organism
rhy
Rhodoferax koreensis
Pathway
rhy03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rhy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
RD110_20815
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhy03400
]
RD110_20815
Enzymes [BR:
rhy01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.31 adenine glycosylase
RD110_20815
DNA repair and recombination proteins [BR:
rhy03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
RD110_20815
Prokaryotic type
RD110_20815
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HhH-GPD
NUDIX_4
HHH
HHH_5
EndIII_4Fe-2S
HHH_8
HHH_3
Motif
Other DBs
NCBI-ProteinID:
APW39357
UniProt:
A0A1P8K033
LinkDB
All DBs
Position
complement(4482216..4483289)
Genome browser
AA seq
357 aa
AA seq
DB search
MSDDILPAVLPGVAEDRAAGSVADRVVHWQASHGRHSLPWQNTVDPYRVWLSEIMLQQTQ
VSAVLEYFPRFLNRFPDVASLAAAQQDEVLVLWAGLGYYSRARNLHKCAQQVVALHGGQF
PGTAAELQTLPGIGRSTAAAIASFCYGERAAILDGNVKRVLTRVLGFDADLSVASNERAL
WDRATALLPLDDLAVAMPRYTQGLMDLGATICLARNPSCLLCPLREVCVGHRSGDPTRFP
VKTKKLKRSTESWWLLWARDAQGRVWLERRPDAGVWAGLFCLPVFASREAIGLAQEGGVE
DLPAFLHVLTHKDLFLHPVRVAWPDGVAPGANGQWVEAARWADFGLPTPVRKLLEAT
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacgatatcctgccggccgtattgcccggcgtggcggaggaccgcgcagccggc
tcggtcgccgatcgcgtggtgcactggcaagccagccatggtcgccacagcctgccttgg
cagaacaccgtggacccgtaccgcgtctggctgtccgagatcatgctgcagcagacccag
gtcagcgcggtgctcgaatactttccgcgtttcctgaaccgcttcccggacgtggcgtcc
ctggcggccgcgcagcaggacgaggtgctggtgttgtgggccggtctcggctactacagc
cgcgcccgcaacctgcataaatgcgcgcagcaggtcgtggctttgcatggtggccagttc
ccgggcacggcggccgaattgcagacgctgcccggtatcggccgctccaccgctgcggcc
atagcgtcgttctgttacggcgaacgcgcggccatcctcgatggcaatgtgaaacgggtg
ttgacacgggtactcggcttcgacgccgacctttcggtggccagcaacgagcgtgcgttg
tgggaccgagccaccgcactgttgccgctcgacgacctcgccgtggccatgccgcgctat
acccaggggctgatggacctgggcgccaccatctgcctggcgcgcaacccgtcctgcctg
ttgtgcccgttgcgcgaagtctgtgtcggccatcgctcgggcgatccgacgcggtttccg
gtgaagacgaaaaagctcaagcgcagcaccgaatcctggtggctgctctgggcgcgggat
gcacagggccgggtgtggctcgaacgccgccccgacgcgggcgtctgggccggcctgttc
tgcctgccggtgttcgccagccgcgaggccatcgggctggcgcaagagggcggtgtggaa
gacctgcccgcattcctgcacgtgttgacccacaaggacctgttcctgcatccggtgcgg
gtggcgtggccggatggcgtggcgcccggcgccaacggccaatgggtggaggccgcacgc
tgggccgacttcggcttgccgacgccggtgcgcaagctgcttgaagcgacctag
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