Rhodoferax koreensis: RD110_20940
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Entry
RD110_20940 CDS
T04721
Name
(GenBank) RNA polymerase sigma factor RpoS
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
rhy
Rhodoferax koreensis
Brite
KEGG Orthology (KO) [BR:
rhy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rhy03021
]
RD110_20940
Transcription machinery [BR:
rhy03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
RD110_20940
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r3
KorB
DprA_WH
Chap-C
CmlA_N
Motif
Other DBs
NCBI-ProteinID:
APW40843
UniProt:
A0A1P8K4A6
LinkDB
All DBs
Position
complement(4507094..4507981)
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AA seq
295 aa
AA seq
DB search
MADGIEPAAVAGDSSDTLTLYLRDVRRTPLFTPSEEFEMATRARAGDFEARQRMIEHNLR
LVVSIAKSYLGRGVPMSDLIEEGNLGLMHAIDKFEPERGFRFSTYATWWIRQAVERAVMN
QGRVIRLPVHVVRELQQVLRARRALENDSAFSALRPEGVRVDDVAALLGRDTQSVADLLA
LAETPRSLDASMDRSEDGSSIGDSLPDDLAIDPSNTTQTHEVERLLEVWIGTLTAREREV
LDARFGLHEREPETLETLSERLGLTRERIRQIQMEALRKLRTYLSRHGIGKDSVL
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atggccgacggcatcgagccggccgcggtggccggcgacagcagcgacacactcaccctg
tacctgcgcgacgtgcgccgcacaccgttgttcacgccgtcggaggaattcgagatggcc
acgcgggcccgcgcgggcgacttcgaggcgcgccagcgcatgatcgagcacaacctgcgg
ctggtggtgagcatcgccaagtcctatctcggccgcggcgtgcccatgagcgatctcatc
gaggaaggcaacctcggcctgatgcacgccatcgacaaattcgagcccgaacgcggtttc
cggttctcgacctatgcgacctggtggattcggcaggcggtggagcgtgcggtgatgaac
caggggcgggtgatccgcctgcccgtgcacgtggtgcgtgaactgcaacaggtgcttcgc
gcgcgccgcgcgctggagaacgattcggctttctcggcgctgcggcccgagggcgtgcgc
gtcgacgacgtggccgcactgctcgggcgggacacgcagtccgtggccgatctgctggcg
ctggcggaaacgccgcgctcgctcgacgcgtcgatggaccgatcggaagacggcagcagc
atcggtgacagcctgccggacgatctggccatcgacccttcgaacaccacccagacccat
gaggtggagcgcctgctcgaagtctggatcggcacgctgaccgcacgcgagcgcgaagtg
ctcgatgcgcgtttcgggctgcacgaacgggagccggaaaccctggaaacgctcagcgag
cggctgggcctgacgcgggagcggatccgtcagatccagatggaggcgctgcgcaaactg
cgcacctatctatcgcggcacgggatcggcaaggattcggtcttgtag
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