Rhodoferax koreensis: RD110_21050
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Entry
RD110_21050 CDS
T04721
Name
(GenBank) serine--tRNA ligase
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
rhy
Rhodoferax koreensis
Pathway
rhy00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
rhy00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
RD110_21050
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
rhy01007
]
RD110_21050
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rhy03016
]
RD110_21050
Enzymes [BR:
rhy01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
RD110_21050
Amino acid related enzymes [BR:
rhy01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
RD110_21050
Transfer RNA biogenesis [BR:
rhy03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
RD110_21050
Prokaryotic type
RD110_21050
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
TMF_TATA_bd
BLOC1_2
DUF3450
CCDC113_CCDC96_CC
HisK-N-like
Baculo_PEP_C
ERM_helical
DUF7491
ABC_tran_CTD
WXG100
Motif
Other DBs
NCBI-ProteinID:
APW39397
UniProt:
A0A1P8K073
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All DBs
Position
complement(4532321..4533640)
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AA seq
439 aa
AA seq
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MLDITHLRKDLASVIDRLESRKKPQAFLNVDAFRALEAERKTIQTRTEELQSRRNTLSKQ
IGQLKAKGESADAVMAEVGGLKAELDASATRLDQIQTELLGLLQAVPNLPHASVPVGADE
HGNVEVRRWSPTERAPGSQSFPVKDHVDLGAPLGLDFEMGVKLTGSRFTVMKGPIARLHR
ALAQFMIDLQTNEHGYTECYVPYIVNADSLAGTGQLPKFEEDLFAAKKGGQEGEAAPDST
ALYLIPTSEVPLTNFVRDEIVAEADLPIRLTAHTPCFRSEAGSAGRDTRGLIRQHQFDKV
EMVQIVHPEKSYEALEQMTGHAEAVLQKLGLPYRVMLLCTGDMGFGAAKTYDLEVWVPAQ
NTYREISSVSNCETFQARRMQARYKTAQGKNELVHTLNGSGLAVGRALVAVLENYQNADG
SITVPEVLRPYIGGLSKLG
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgctagacatcacccacctccgaaaagatctcgcctcggtcatcgaccggctggaatcg
cgcaagaaaccccaggctttcctgaatgtggacgcgttccgcgcgctggaagccgagcgc
aagaccatccagacccgcaccgaggaactgcagtcgcggcgcaacacgctgtccaagcag
atcggccagctcaaggccaagggtgagagcgccgatgccgtgatggccgaggtgggcggc
ctcaaggccgaactcgatgcgtcggccacgcggctcgaccagatccagaccgaactgctc
ggcctgctgcaggccgtgccgaatctgccgcatgcgagcgtgccggtcggcgccgacgaa
cacggcaacgtcgaagtgcgccgctggagcccgaccgaacgcgcacccggcagccagagc
tttcccgtcaaggaccatgtcgacctcggcgcgccgctgggcctcgacttcgagatgggc
gtgaagctcaccggctcgcgtttcaccgtgatgaagggcccgatcgcgcggctgcaccgg
gcgctggcccagttcatgatcgacctgcaaacgaacgagcacggctacaccgagtgctac
gtgccctacatcgtcaacgcggattcgctcgccggcaccgggcaattgccgaaattcgaa
gaggacctgttcgccgcgaaaaagggcggccaggaaggcgaggccgcgcccgacagcacg
gcgctgtacctgattcccacgagcgaagtgccgctcaccaacttcgtgcgcgacgagatc
gttgccgaggccgacctgccgatccgcctcaccgcgcacacgccatgcttccgttcggag
gccggcagcgccgggcgcgacacgcgcggcctgattcgccagcaccagttcgacaaggtg
gagatggtgcagatcgtgcaccctgaaaagagctacgaggcattggagcagatgaccggc
cacgccgaagccgtgctgcaaaagctcggcctgccgtaccgcgtgatgctgctgtgcacc
ggcgacatgggtttcggcgcggccaagacctacgacctcgaagtctgggtgccggcgcag
aacacctaccgcgagatcagttccgtgtccaactgcgagaccttccaggcgcgccgcatg
caggcgcgctacaagacggcgcaaggcaagaacgaactggtgcacacgctgaacggttcc
ggtctggccgtcggccgcgccctggtggccgtgctcgagaactaccagaacgccgacggc
agcatcaccgtgcccgaggtgctgcgcccctacatcggcggcttgagcaaattgggctga
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