Rhodoferax koreensis: RD110_22580
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Entry
RD110_22580 CDS
T04721
Name
(GenBank) ABC transporter ATP-binding protein
KO
K02052
putative spermidine/putrescine transport system ATP-binding protein
Organism
rhy
Rhodoferax koreensis
Pathway
rhy02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rhy00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RD110_22580
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rhy02000
]
RD110_22580
Transporters [BR:
rhy02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
RD110_22580
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
SMC_N
TOBE_2
AAA_29
ABC_ATPase
nSTAND1
AAA_25
AAA_22
RsgA_GTPase
AAA_16
nSTAND_NTPase5
CysA_C_terminal
NACHT
AAA_23
AAA_18
AAA_33
Rad17
AAA_14
Motif
Other DBs
NCBI-ProteinID:
APW39648
UniProt:
A0A1P8K0W7
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All DBs
Position
complement(4871034..4872062)
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AA seq
342 aa
AA seq
DB search
MSLVLDQVSYRYPGTTQGLHDISLDVRTGELVAVIGPSGSGKSTLLKLVSGLETGHSGRI
ALDGEDLSNKPVHQRHIGMVFQSYALFPHLDVLDNVAYGLKLRKMPAAERTRRAQELLDV
VGLGDYAQRAVAQLSGGQQQRVALARALAIDPRALLLDEPLSALDASVRGHLRDQIRAIQ
QRFNATTLLVTHDQEEALTMADRVAVMKDGRLLQIAAPRELYERPASRAVAQFVGLSTLL
PATVCASDRVDLGFAELAAPTGSRRPGAAVHVLIRPEHIQGDPPAGSLNRLTGRAGAQRF
LGALTRYDFEVPGASRPFLADSAWPAREAIGIAPEHVRLLDD
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgagccttgtcctcgatcaagtcagctaccgctaccccggcaccacgcagggcctgcac
gacatctcgctggacgtgcgcaccggcgaactggtcgcggtgatcgggccgagcggctcg
gggaagtcgaccctgctcaagctcgtctccggcctggagaccggccacagcggtcgcatc
gcgcttgacggcgaagacttgtcgaacaagccggtgcaccagcgccacatcggcatggtg
ttccagagttatgcgctgtttccgcacctcgacgtgctggacaacgtggcctacggcctg
aagctgcgcaagatgcccgcggccgagcgcacgcggcgcgcgcaggaactgctcgacgtc
gtcggactgggcgattacgcgcaacgcgccgtggcgcaactctcgggcggccagcagcag
cgcgtggcgctggcccgtgcgttggccatcgacccgcgcgcgctgctgctcgacgagccg
ctgtccgcactcgacgccagcgtgcgtggccatctgcgcgaccagatccgagcgatccag
cagcgcttcaatgccaccacgctgctggtgacgcacgaccaggaagaagcgctcaccatg
gccgatcgcgtggccgtgatgaaggacggccggctgctgcagatcgcggcgccgcgcgag
ttgtacgagcgtccggccagccgggccgtggcccagttcgtcggcctgtcgaccctgctg
ccggccacggtctgcgccagcgatcgcgtggacctcggattcgcggagctcgccgcgccg
accggctcgcgcaggcccggcgcggccgtgcacgtgctgatccggcccgaacacatccag
ggcgatccgcctgcggggagcctgaaccggctcacaggccgcgccggcgcgcagcgcttc
ctgggggccctgacccgctacgacttcgaggtgcccggcgccagccgcccctttctggcg
gattcggcctggccggcgcgcgaggccatcggcatcgcaccggaacacgtgcggctgctg
gacgactga
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