Rhodoferax koreensis: RD110_24065
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Entry
RD110_24065 CDS
T04721
Name
(GenBank) UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase
KO
K01929
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:
6.3.2.10
]
Organism
rhy
Rhodoferax koreensis
Pathway
rhy00300
Lysine biosynthesis
rhy00550
Peptidoglycan biosynthesis
rhy01100
Metabolic pathways
rhy01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
rhy00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
RD110_24065
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
RD110_24065
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
RD110_24065
Enzymes [BR:
rhy01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.10 UDP-N-acetylmuramoyl-tripeptide---D-alanyl-D-alanine ligase
RD110_24065
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GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
APW40925
UniProt:
A0A1P8K4I7
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Position
complement(5200756..5202192)
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AA seq
478 aa
AA seq
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MMTLAQALAWIPGGRLHGDGAVAIQRVHTDTRSLQPGDLFVALRGDNFDANTMLAQAKAS
GAVAALCHAGASGGIQATGLPCIEVDDTLAALGALATGWRSQFRLPLIAVTGSNGKTTVT
QMIASILRAAEPEASLATQGNYNNEIGVPLTLLRLSAAHRLAVVELGMNHPGEIARIAAM
ARPTVALVNNAQREHMEFMATVEAVARENGVVLQAMAEDGVAVFPADDDYAHIWRELAGP
RVTSTFAMVGPADITCDEPVWAEGAWQVRARTPAGDVAYGLHIAGRHNVKNSLAAIGCAL
AAGVSLDAIGRGLAAFEPVKGRSRALALTIEDRALTLVDDSYNANPDSVIAAIEVLAGLP
GPRLLVLGDMGEVGDQGPQFHAEVGARAAQAGIEHVLTLGELTAHTVQAFGQASPGLCRH
FGADVDALNAAIAALLPGVASVLVKGSKFMKMPRVVDFIVASAKSPSQQVSKEPNHAA
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgatgaccctggcccaggcgctggcatggattcccggcggccgtctccatggcgacggc
gccgtcgccatccagcgcgtgcacaccgacacacgcagcctgcagccgggcgacctgttc
gtcgccttgcgcggcgacaacttcgacgccaacacgatgctggcgcaggccaaggccagc
ggcgccgtggcggccctgtgccatgcgggcgcgagcggcggcatccaggccaccggcctg
ccgtgcatcgaggtggacgacacgctggccgcgctcggcgccctggccacgggctggcgc
agccagttcagactgccgctgatcgccgtgaccggcagcaacggcaagaccacggtgacg
cagatgatcgccagcatcctgcgcgccgccgagccggaggcctccctcgccacgcagggc
aactacaacaacgagatcggcgtgccgctgacgctgctgcgcctctcggccgcgcaccgg
ctggccgtggtcgagctcggcatgaaccacccgggcgagatcgcccggatcgccgccatg
gcccggccgacggtggccctggtcaataacgcgcaacgcgagcacatggagttcatggcc
acggtggaagccgtggcgcgggaaaacggcgtcgtcctccaggccatggcggaagatggc
gtggccgtgttcccggccgacgacgactatgcccatatctggcgcgaactggccggtcca
cgcgtgacgagcaccttcgcgatggttggcccggccgacatcacctgcgacgagcccgtc
tgggccgaaggcgcatggcaggtgcgggcccgcacgccggcgggcgacgtggcctatggc
ctgcacatcgccggtcggcacaacgtgaagaattcgctggccgcgatcggctgcgcactc
gccgccggcgtttcgttagacgccatcggccgcgggcttgcggccttcgaacccgtcaag
ggccgttcgcgcgcgctcgcgctgaccatcgaggaccgcgcgctgaccctggtagacgac
agctacaacgccaaccccgattccgtgatcgccgcgatcgaggtgctggctggcctgcct
ggcccgcgcctgctggtgctcggcgacatgggcgaggtcggcgaccaggggccgcagttc
catgccgaggtcggcgcgcgtgcggcgcaggccggcatcgagcacgtgttgacgctcggc
gagctgacggcacataccgtgcaggccttcggtcaagccagtccaggtttgtgccgtcat
ttcggcgccgacgtggacgcgctcaacgcggccattgcggccctgctgcctggcgtggcg
agcgtgctcgtcaaaggctccaaattcatgaagatgccgcgcgtggtcgatttcatcgtc
gccagcgccaagtcgccatcccaacaagtttccaaggagcccaaccatgctgcttag
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