Rhodoferax koreensis: RD110_24135
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Entry
RD110_24135 CDS
T04721
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
rhy
Rhodoferax koreensis
Pathway
rhy00300
Lysine biosynthesis
rhy00470
D-Amino acid metabolism
rhy01100
Metabolic pathways
rhy01110
Biosynthesis of secondary metabolites
rhy01120
Microbial metabolism in diverse environments
rhy01230
Biosynthesis of amino acids
Module
rhy_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
rhy00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
RD110_24135
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
RD110_24135
Enzymes [BR:
rhy01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
RD110_24135
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GFIT
Motif
Pfam:
DAP_epimerase
Hexokinase_2
Motif
Other DBs
NCBI-ProteinID:
APW40928
UniProt:
A0A1P8K4K7
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Position
complement(5217391..5218275)
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AA seq
294 aa
AA seq
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MHIPFTKMQGAGNDFVVLDETAGLFGLSAAQYRFLADRHFGVGADQILSVRPSPAAGIDF
EYVIHNADGGEVEQCGNGARCFARFVRDTGLTTQDRIRVATKSGVIEPLLTADGRVTVDM
GAPVFDLAQVPFDAAGLVPEPVGAWQKWPLMLDHAVQLAPYVVAVLSMGNPHAVHVVEDT
EAAPVALLGPLVEHHPRFPNRVNAGFMQVLDSGRIRLRVFERGAGETLACGTGACAAVVA
GIRLGLLERQVDVYTHGGMLSVAWSGQLGDPVYMTGPATTVFSGEITIPENLSA
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atgcacatcccattcaccaagatgcagggcgcgggcaacgacttcgtcgtgctcgatgaa
accgccggcctgttcggcctgagcgccgcccagtaccggttcctggccgaccgccatttc
ggcgtgggcgcggaccagatcctcagcgtgcggccgtcgcccgcggcaggcatcgacttc
gaatacgtgatccacaacgccgacggcggcgaggtcgagcagtgcggcaacggcgcgcgc
tgtttcgcgcggttcgtgcgcgacacgggcctcaccacccaggaccgcatccgcgtggcg
accaaaagcggcgtgatcgaacccctgctcacggccgacggccgtgtcacggtcgacatg
ggcgcgccggtgttcgatctggcccaggtgcccttcgacgccgccggcctcgtgccggag
ccggtcggcgcgtggcagaaatggccgctgatgctggaccacgcggtgcagctcgcaccc
tatgtggtcgccgtgctgtcgatgggcaacccgcatgccgtgcatgtggtggaagacacg
gaagccgcgccggtggccctgctgggcccgctggtcgaacaccatccgcgttttcccaac
cgggtcaacgccggcttcatgcaggtgctcgacagcggccgcatccgcctgcgcgtcttc
gagcgcggcgcgggcgaaaccctggcctgcggcaccggcgcatgtgcggccgtggtggcc
ggcatccggctgggcctgctcgagcgccaggtggacgtctacacccatggcggcatgctc
agcgtcgcctggtcgggccagctgggcgacccggtctacatgaccggccccgccaccacc
gtgttttcgggcgagatcactattccggaaaacctgtcggcttaa
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