Rhodoferax koreensis: RD110_24375
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Entry
RD110_24375 CDS
T04721
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
rhy
Rhodoferax koreensis
Pathway
rhy02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rhy00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RD110_24375
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rhy02000
]
RD110_24375
Transporters [BR:
rhy02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
RD110_24375
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
APW39952
UniProt:
A0A1P8K1Q9
LinkDB
All DBs
Position
complement(5267333..5268952)
Genome browser
AA seq
539 aa
AA seq
DB search
MSDSKNKFDSFVGPAESTRVMDSLRRGATRRDILSMLLAGGMQATLAGGLATAAISAHAD
TPRKGGRIRVAGATAAANDTLDPAKQSNQTDYSRGTMLYNGLTSLDSSLTPQPALAESFS
TTDAKTWVFTLRKGVVFHDGKALAPADVVYSLMRHKDPATASKAKVLADQIDSVKATGPN
EVTVVLSAPNADLPVIVGTFHFHIVKDGTTDFNAGIGTGPYKLKEFKPGVRSLVVRNEAY
WKPGKPYLDEIEFVGIGDESARVNALLSGGMDLVASVNPRSVARVKGTPGYAIFTTQSGQ
YSDLIMRRDVGPGMNPDFAMAMKYLFDREQMKKTIALDYAVIANDQPIDPTNRFYFAGLP
QRTMDLDKAKFHLQKSGVTGKVPMVTSPAAMYSVEIALLLQQTGQRIGLDIDLKRMPADG
YWSNHWLNSPVGFGNVNPRPSADTLLTQFFQSDAAWNESRWKNPKFDQLLLASRAETDQA
KRKQQYADMQTMIHQEAGIGIPMFLASIDGHSSKLKGLSPIPLGGLMGYSFAENVWLDA
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacagcaaaaacaagttcgacagcttcgtcggtcccgccgagagcacccgtgtg
atggattcgctgcgacgcggcgccacgcggcgggatatcctgtcgatgctgctggccggc
ggcatgcaggccacgctcgcgggtgggctggccacggcggccatctcggcgcatgccgac
acaccgcgcaaaggaggccgcattcgcgtggccggtgccacggccgcggcgaatgacaca
ctcgatccggccaagcagtcgaaccagaccgactactcgcgcggcaccatgctctacaac
ggcctgacctcgctcgacagcagcctcacgccgcagccggcgctggccgagtccttcagc
accaccgacgcgaagacctgggtgttcaccctgcgcaagggcgtggtcttccatgacggg
aaggcgctggcgccggccgacgtggtgtattcgctgatgcgccacaaggacccggcgacc
gcctccaaggccaaggtgctggccgaccagatcgacagcgtgaaggccaccggcccgaac
gaggtcaccgtggtgctcagcgcgcccaacgccgacctgccggtcatcgtcggcaccttc
catttccacatcgtcaaggacggcaccacggatttcaacgccggcatcggcaccggcccc
tacaagctcaaggagttcaagcccggcgtgcgttctctggtggtgcgcaacgaggcctac
tggaagccgggcaagccctatctcgacgagatcgagttcgtgggcatcggtgacgaaagc
gcacgtgtcaacgccctgctgtcgggcggcatggacctggtggcctcggtcaacccgcgc
tcggtggcgcgtgtcaagggcacgccgggttatgcgatcttcaccacgcaatcgggccag
tattcggacctgatcatgcgccgcgacgtcggccctggcatgaaccccgactttgcgatg
gcgatgaagtacctgttcgaccgggaacagatgaagaagaccatcgcgctcgactacgcc
gtcattgccaacgatcagccgatcgacccgaccaaccgcttctactttgccggcctgccc
cagcgcaccatggacctggacaaggccaagttccacctgcagaaatcgggcgtgaccggc
aaggtgccgatggtgacctcgcccgccgcgatgtattccgtggagatcgcgctgctgctg
cagcagaccggccagcgcatcggcctggacatcgacttgaagcgcatgccggccgacggc
tactggtccaaccactggctcaacagcccggtgggcttcggcaacgtgaacccgcgcccc
agcgccgacacgctgctcacccagttcttccagtccgatgccgcctggaacgagtcgcgc
tggaagaacccgaagttcgaccagttgctgctcgcctcccgcgccgagaccgaccaggcc
aagcgcaagcagcagtatgccgacatgcagaccatgatccaccaggaagccggtatcggc
atcccgatgttcctggccagcatcgacggacacagcagcaagctcaagggcctgtcgccg
attccactgggcgggctgatggggtactcgttcgccgaaaacgtctggctggacgcatga
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