Rhodoferax koreensis: RD110_25345
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Entry
RD110_25345 CDS
T04721
Name
(GenBank) hydroxymethylglutaryl-CoA lyase
KO
K01640
hydroxymethylglutaryl-CoA lyase [EC:
4.1.3.4
]
Organism
rhy
Rhodoferax koreensis
Pathway
rhy00280
Valine, leucine and isoleucine degradation
rhy00650
Butanoate metabolism
rhy00907
Pinene, camphor and geraniol degradation
rhy01100
Metabolic pathways
rhy01120
Microbial metabolism in diverse environments
rhy04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
rhy00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
RD110_25345
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
RD110_25345
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
RD110_25345
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
RD110_25345
Enzymes [BR:
rhy01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.4 hydroxymethylglutaryl-CoA lyase
RD110_25345
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Motif
Pfam:
HMGL-like
Gp49_Pectate_lyase_like
Motif
Other DBs
NCBI-ProteinID:
APW40120
UniProt:
A0A1P8K295
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Position
5471909..5472841
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AA seq
310 aa
AA seq
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MTTPDILVSEVGPRDGLQSVKATMPTADKLRWIDALHRAGIREIEVASFVPARLLPQMAD
AAEVVRHAVTLPGLTVMALVPNRRGAEAALASGVHKLTMPVSASAAHSLANVRKTREEMI
DEVRAIAELRRDLAPHVKLEAGISTAFGCTLQGDVPEDEVIWLAAQCVAAGADEAGLSDT
VGYANPAQVRRLFRRLRAELGDRAGAAHMHNTRGLGLANCLAAIEEGVRTFDASLGGLGG
CPYAPGASGNVVTEDLVFMFEAMGISTGIDLEKLLAARAPLMAGLPGEPVYGMTPEAGLP
KGFVQGKTHV
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgacaactcccgacattctcgtcagcgaggtcggcccgcgcgacggcctgcaatcggtg
aaggccaccatgccgaccgccgacaaactgcgctggatcgatgcgctgcaccgcgccgga
atccgcgagatcgaggtcgcctctttcgtgccggcgcgcctgctgccgcagatggccgat
gccgccgaggtggtgcgccatgccgtcaccctgccgggcctcaccgtgatggcgctggtg
ccgaaccggcgcggcgccgaggccgcgcttgcgtccggcgtgcacaagctcaccatgccg
gtctcggccagcgccgcgcattcgctggccaacgtccgcaagacgcgcgaggagatgatc
gacgaagtgcgcgccatcgccgagttgcgccgcgacctcgcaccacacgtcaagctggaa
gccggcatctccaccgccttcggctgcacgctgcagggcgatgtgcccgaggacgaggtg
atctggctcgccgcgcaatgcgtggccgcgggcgccgacgaagccggcctgtccgacacc
gtgggctacgccaacccggcccaggtgcgccggctgttccgccgcctgcgcgcggagctc
ggcgaccgggccggcgcggcccacatgcacaacacacgcggcctgggcctggccaattgc
ctcgcggctatcgaggaaggcgtgcgcaccttcgacgcctcgctcggtggcctgggcggc
tgcccgtacgcgcctggcgcctcgggcaatgtcgtgaccgaagacctggtgttcatgttc
gaggccatggggatttccaccggcatcgatcttgaaaagctcctcgccgcgcgtgcgcca
ttgatggccggcctgcccggcgaaccggtctatggcatgacgcccgaagccggcctgccc
aaaggattcgttcaaggaaaaacccatgtctga
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