Rhodoferax koreensis: RD110_26285
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Entry
RD110_26285 CDS
T04721
Name
(GenBank) multifunctional fatty acid oxidation complex subunit alpha
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
rhy
Rhodoferax koreensis
Pathway
rhy00071
Fatty acid degradation
rhy00280
Valine, leucine and isoleucine degradation
rhy00310
Lysine degradation
rhy00362
Benzoate degradation
rhy00380
Tryptophan metabolism
rhy00410
beta-Alanine metabolism
rhy00640
Propanoate metabolism
rhy00650
Butanoate metabolism
rhy00907
Pinene, camphor and geraniol degradation
rhy00930
Caprolactam degradation
rhy01100
Metabolic pathways
rhy01110
Biosynthesis of secondary metabolites
rhy01120
Microbial metabolism in diverse environments
rhy01200
Carbon metabolism
rhy01212
Fatty acid metabolism
Module
rhy_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
rhy00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
RD110_26285
00650 Butanoate metabolism
RD110_26285
09103 Lipid metabolism
00071 Fatty acid degradation
RD110_26285
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
RD110_26285
00310 Lysine degradation
RD110_26285
00380 Tryptophan metabolism
RD110_26285
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
RD110_26285
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
RD110_26285
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
RD110_26285
00930 Caprolactam degradation
RD110_26285
Enzymes [BR:
rhy01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
RD110_26285
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
RD110_26285
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
RD110_26285
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
RD110_26285
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Paralog
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GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
APW40275
UniProt:
A0A1P8K2N0
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All DBs
Position
5693507..5695657
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AA seq
716 aa
AA seq
DB search
MFQGETIEVLPLQDGLVELRFDRRGERINKLDARTIDEFRQATERIAAAPEVRGVLVTST
KDAFIVGADIAEFGALFQQPAENIAAAVRANSKHFCLFEDLAVPTVVALNGFALGGGLEL
ALLGTFRVMAGTAQVGVPEVRLGLLPGLGGTVRLSRVAGLATAIDWVTGGKPAEAAAALA
AGVVDEVVPAEALRERALQLLQRAAGGEIDWQDRQQRKRRALPVKTEEIDRIAQAARSRL
VTRRPRHQPAAHTALGMMIEAAACERDAALDQEATALGQLARTQAAASLVQGFLNDQALK
RLFMQHLRKGRAVRHAAVLGAGIMGGGIAYTSALHGVPVRLKDIAASQLEVGMQEAARQL
DQRVRNGGIAQDRAYAVLASIVPQLDDAGLDAVDCVIEAVVEDLATKRKVLAALEHAVGP
DTVIASNTSSLRIDDIATALARPERCVGMHFFNPVPAMKLVEVVRGTRTSDAAVSTAVGY
AVAMGKTPIVVKDCPGFLVNRILTPYVSAFVQLVADGADFEQVDRAMEVFGWPMGPAYLQ
DVVGMDVAAHVGDLIAAGYPDRMPRVARHAIKLMVAHQRYGQKNGAGFYRYEADATGRPR
RVSAPEAHALVATLQPGGPRAFSDGEIVERMMLPMIVEAAHALEEGVVATAAELDMALLL
AVGFPAHAGGALQYADWLGLAQVVARCDRHAALGPQYAPTARMRGMAARGLRYYPR
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
ttgttccaaggtgaaaccattgaagtcctgccgctgcaggacggcctcgtcgaactgcgt
ttcgaccgccgaggcgagcgcatcaacaagctcgacgcgcgcaccatcgacgaatttcgg
caggccaccgagcgcatcgccgccgcacccgaagtacgcggcgtgctcgtgaccagcacg
aaggacgcgttcatcgtcggtgcggacatcgcggagttcggcgcgctgttccagcagccg
gccgaaaacattgcggccgcggtgcgcgccaacagcaagcacttctgtcttttcgaggac
ctcgcggtgcccacggtggtggcgctcaacggcttcgcactcggcggcggactggagctc
gcgctgctcggcacgttccgcgtcatggccggcacggcacaggtgggcgttcccgaggtt
cggctgggcctgctgccgggcctgggcggcaccgtgcggctgtcgcgcgtggcggggctg
gccaccgccatcgactgggtcaccggcggcaagccggccgaggcggcggccgcgctggcc
gccggcgtggtcgacgaggtggtgcccgccgaggcgttgcgcgaacgcgcgctccagctc
ctgcagcgcgcggcgggtggcgaaatcgattggcaggaccgtcagcagcgcaagcggagg
gcgttgccggtgaagacggaagagatcgaccgcatcgcgcaggccgcacgcagccggctg
gtcacgcgccgcccgaggcaccagccggccgcgcacacggcgctgggaatgatgatcgaa
gccgcggcctgcgagcgcgatgccgcgctcgaccaggaggccaccgctctcggccaattg
gccaggacgcaggccgcggcgtcgttggtgcagggctttctcaacgaccaggcgctgaag
aggcttttcatgcagcacctgcgcaaaggccgcgccgtgcggcatgcggcggtgctgggc
gcaggcatcatgggcggtggcattgcctacaccagcgccctgcacggcgtgccggtgcgc
ctgaaggacatcgcggcatcgcagctcgaggtcgggatgcaggaggccgccaggcagttg
gaccaacgggtccgcaatggcggaatcgcacaggacagggcctatgccgtgctggcgtcg
atcgttccgcaactcgacgatgcgggcctggatgcggtcgactgcgtgatcgaggccgtg
gtcgaagacctcgccaccaagcgcaaggtgctggccgcactggaacacgcggtgggcccc
gacacggtcatcgcgtcgaacacctccagcctgcgcatcgatgacattgcgacagcgctc
gcacgacccgaacgctgcgtgggcatgcatttcttcaacccggtgcccgcgatgaagttg
gtcgaggtggtccggggaacccggaccagcgacgccgcggtgtcgacggccgtcggctac
gcggtcgcgatgggcaagacgccgatcgtggtcaaggactgcccgggcttcctggtcaat
cgcatcctgacgccctatgtcagcgccttcgtgcagctggtggccgatggtgccgacttc
gagcaagtggaccgtgcgatggaagtcttcggctggcccatggggccggcctacctgcag
gacgtggtgggcatggatgtggccgcgcacgtgggcgacctgatcgcggcaggctacccg
gaccgcatgccgcgggtggcgcgccacgccatcaagctcatggtggcgcaccagcgttac
ggccagaagaacggcgcgggcttctaccgctacgaagccgacgcgacgggccggccgcgc
cgcgtctcggcgcccgaggcgcacgcgctcgtcgccacgctgcaacccgggggcccccgc
gcattcagcgatggcgagatcgtcgaaaggatgatgctgccgatgatcgtcgaagccgcg
cacgcactggaggaaggcgtggtcgccaccgcggccgagctcgacatggccttgctgctg
gccgtcggcttcccggcccatgcgggtggcgcgttgcaatacgccgactggctggggctc
gcgcaggtggtcgcgcggtgcgaccggcatgcggcgctcggcccccaatacgcaccgacc
gcccggatgcgcgggatggccgcacgcggcctgcgctactacccgcgttga
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