Rugositalea oryzae: RHPLAN_00040
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Entry
RHPLAN_00040 CDS
T04290
Name
(GenBank) DNA gyrase, B subunit
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
rhz
Rugositalea oryzae
Brite
KEGG Orthology (KO) [BR:
rhz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rhz03032
]
RHPLAN_00040
03400 DNA repair and recombination proteins [BR:
rhz03400
]
RHPLAN_00040
Enzymes [BR:
rhz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
RHPLAN_00040
DNA replication proteins [BR:
rhz03032
]
Prokaryotic type
DNA Topoisomerases
RHPLAN_00040
DNA repair and recombination proteins [BR:
rhz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
RHPLAN_00040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
GyrB_insert
HATPase_c_3
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
AMN38469
LinkDB
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Position
5279..7708
Genome browser
AA seq
809 aa
AA seq
DB search
MAEPARNIPTDDYGADSIKVLKGLDAVRKRPGMYIGDTDDGSGLHHMVYEVVDNAIDEAL
AGHATEVLVQLNPDGSCTVRDNGRGIPTDIHKEEGISAAEVIMTQLHAGGKFDQNSYKVS
GGLHGVGVSVVNALSTWLRLTIWRDGKEHSMEFRDGDAVAPLKLIGDAPADKRGTEVSFL
PSPQTFTMTEFDFATLEHRLRELAFLNSGVNIVLSDMRHAVEKRDQMRYDGGVEEFVKYL
DRNKNALIPAPITLKSERDGVTVECAMTWNDSYHETVLCFTNNIPQRDGGTHLAGFRGAL
TRQVTSFAENMGGARKEKVDLTGDDCREGLTCVLSVKVADPKFSSQTKDKLVSSEVRPAV
EGIVNERLSAWFEQHPAEAKAIIGKVVEAAAAREAARKARELTRRKGALDVNSLPGKLAD
CQERDPSKSELFIVEGDSAGGSAKQGRNREFQAVLPLRGKILNVERARFDKMLSSQEIGT
LITALGTGIGREEFAPDKLRYHKIIIMTDADVDGAHIRTLLLTFFYRQMPELIDRGHLYI
AQPPLYKVARGKSEQYLKDERALEDFLIASGLDEAVFKTFSGEERAGHDLHDLVEQGRIV
RNVLAGIHSRYNRKVVEQAAIAGVLNTKVIGDPQAASQAASYIAKRLDTLSEETERGWEG
KFVEGEGFLFERVVRGVKDVAIIDYALLNSADARRLDEYAAALQAVYVRQGVLRRKDEET
PIHGPVSLFEAITSTARKGLTLQRYKGLGEMNPGQLWETTLDSNARSLLQVKVKEIDEAS
DIFAKLMGDEVEPRRDFIQENALAASVDA
NT seq
2430 nt
NT seq
+upstream
nt +downstream
nt
atggccgagcccgcccgcaacatcccgaccgacgactatggcgcagactccatcaaggtc
ctcaagggcctcgacgcagtgcgcaagcggccgggcatgtacatcggcgacaccgatgac
ggctcgggcctgcatcacatggtctacgaggtcgtcgacaatgcgatcgacgaggcattg
gccggccacgccaccgaggtgctggtgcagctcaatcccgacggctcgtgcacggtgcgc
gacaacggccgcggcatcccgaccgacatccacaaggaggaaggcatctcggcggccgag
gtcatcatgacccagctccatgccggcggaaaattcgaccagaactcctacaaggtttcc
ggcggtctgcacggcgtcggcgtctcagtcgtcaacgcgctgtcgacatggctccggctc
accatctggcgcgacggcaaagaacactccatggagttccgcgacggcgacgccgtggcg
ccgctcaaactgattggcgacgcgccggcggacaaacgcggcactgaagtgagcttcctg
ccctcgccgcagactttcaccatgacggagtttgatttcgccacgctggagcaccggctg
cgcgaactcgcgttcctgaattccggcgtcaacatcgtgctgtccgacatgcgccacgcg
gtcgagaagcgcgaccagatgcgttacgacggcggcgtcgaggaattcgtcaaatatctc
gatcgcaacaagaacgcgttgatccctgcgccaatcacgctgaaatccgagcgcgacggc
gtcacggtcgaatgcgcgatgacgtggaacgacagctaccacgagaccgtgctctgcttc
accaacaatatcccgcagcgcgatggcggcacgcacttggcgggcttccgcggcgcgctg
acgcggcaggtcacgagttttgccgagaacatgggcggcgcccgcaaggagaaggtcgac
ctgaccggcgacgactgccgcgagggcctcacctgcgtgctgtccgtgaaggtcgccgat
ccgaagttctcgtcgcagacgaaagacaagctcgtctcgtcggaagtgcgtcccgccgtc
gagggcatcgtcaacgaacggctctccgcgtggttcgagcagcacccggccgaggccaag
gccatcatcggcaaggtggtcgaagccgccgccgcccgcgaggcggcgcgcaaggcgcgc
gagctgacgcggcgcaagggcgcgctcgatgtcaattcgctgcccggcaagctcgccgac
tgccaggagcgcgatccgtcgaagtcagaactgttcatcgtcgagggtgactcggccggc
ggctccgccaagcagggccgcaaccgcgaattccaggccgtgctgccgctgcgcggcaag
atcctcaacgtggagcgcgcgcgcttcgacaagatgctgtcgagccaggagatcggcacg
ctgatcaccgcgctcggcaccggcatcggccgcgaggaattcgcgcccgacaagctgcgc
tatcacaagatcatcatcatgacggacgccgacgtcgacggcgcccacatccgcacgctg
ctgttgacgttcttctaccggcagatgccggagctgatcgaccgcggccatctctacatc
gcgcagccgccgctctacaaagtcgcccgcggcaagtccgagcagtatctcaaggacgag
cgcgcgctggaggacttcctgatcgcgtcgggcctggatgaggcggtgttcaagacgttc
tcgggcgaagagcgtgccggccacgacctgcacgacctggtcgagcagggccgcatcgtc
cgcaacgtgctggccggcattcacagccgttacaaccgcaaggtcgtcgagcaggccgcg
atcgcaggcgtgctcaacaccaaggtgatcggcgatccgcaggcggcaagccaggccgcg
agctacatcgccaagcgtctcgacacgctgtccgaggaaaccgagcgcggctgggaaggc
aagttcgtcgagggcgaaggcttcctgttcgagcgcgtcgtgcgcggcgtcaaggacgtt
gcgatcatcgattacgcgctcttgaactccgctgacgcccgcaggctcgacgaatatgcc
gcggcgcttcaggcggtctatgtccgccaaggtgtgctccgtcgcaaggacgaggagacc
ccgatccacgggccggtgagcctgttcgaggccatcaccagcacggcgcgcaagggcctc
acgctgcagcgctacaaagggctgggcgagatgaacccgggtcagctctgggagaccacg
ctcgacagcaacgcccgctcgctcctgcaggtgaaggtcaaggaaatcgacgaggcgagc
gacatcttcgccaagctgatgggcgacgaggtcgaaccgcgccgcgacttcatccaggaa
aacgcgctggccgcgagcgtcgacgcataa
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