Rhodoplanes sp. Z2-YC6860: RHPLAN_05040
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Entry
RHPLAN_05040 CDS
T04290
Name
(GenBank) 2-oxoglutarate dehydrogenase E3 component
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
rhz
Rhodoplanes sp. Z2-YC6860
Pathway
rhz00010
Glycolysis / Gluconeogenesis
rhz00020
Citrate cycle (TCA cycle)
rhz00260
Glycine, serine and threonine metabolism
rhz00280
Valine, leucine and isoleucine degradation
rhz00310
Lysine degradation
rhz00380
Tryptophan metabolism
rhz00620
Pyruvate metabolism
rhz00630
Glyoxylate and dicarboxylate metabolism
rhz00640
Propanoate metabolism
rhz00670
One carbon pool by folate
rhz00785
Lipoic acid metabolism
rhz01100
Metabolic pathways
rhz01110
Biosynthesis of secondary metabolites
rhz01120
Microbial metabolism in diverse environments
rhz01200
Carbon metabolism
rhz01210
2-Oxocarboxylic acid metabolism
rhz01240
Biosynthesis of cofactors
Module
rhz_M00009
Citrate cycle (TCA cycle, Krebs cycle)
rhz_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
rhz_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
rhz00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
RHPLAN_05040
00020 Citrate cycle (TCA cycle)
RHPLAN_05040
00620 Pyruvate metabolism
RHPLAN_05040
00630 Glyoxylate and dicarboxylate metabolism
RHPLAN_05040
00640 Propanoate metabolism
RHPLAN_05040
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
RHPLAN_05040
00280 Valine, leucine and isoleucine degradation
RHPLAN_05040
00310 Lysine degradation
RHPLAN_05040
00380 Tryptophan metabolism
RHPLAN_05040
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
RHPLAN_05040
00670 One carbon pool by folate
RHPLAN_05040
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rhz04147
]
RHPLAN_05040
Enzymes [BR:
rhz01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
RHPLAN_05040
Exosome [BR:
rhz04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
RHPLAN_05040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
NAD_binding_8
Pyr_redox_3
FAD_binding_2
FAD_oxidored
AlaDh_PNT_C
GIDA
HI0933_like
FAD_binding_3
Thi4
DAO
3HCDH_N
Lycopene_cycl
Motif
Other DBs
NCBI-ProteinID:
AMN38969
UniProt:
A0A127EPC0
LinkDB
All DBs
Position
557898..559298
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AA seq
466 aa
AA seq
DB search
MSYDLIVIGTGPGGYVCAIRAAQLGMKVTVVEKRATHGGTCLNVGCIPSKALLHASEMFE
EAGHSFAKMGIGVGTPKLDLPALLKFKDEAVDGNVKGVDYLLKKNKIDSVRGTGKIAGPG
KVEVKGADGKTQVLETKSIVIATGSDVAKLRGVDTDGKRIVTSDEAIALPKVPGKLLVVG
AGVIGLELGSVWRRLGAQVTVVEFLDRILPGMDNEVARQSQRLLEKQGIVFKLGSKVTGV
NSSGATLKASVEPAKGGAAETLDADVVLVAIGRVPFTEGLGLDEAGVKKDNRGRVVTDAH
FATSVPGIYAIGDVIAGPMLAHKAEDEGMAAAEIIAGKAGHVNYDVIPAVVYTFPEIASV
GKGEEELKEAGVAYNVGKFPFTANGRAKANQQTDGFVKILADAKTDRVLGVHIVGSDAGN
MIAEAAIAMEFGASSEDIARTCHAHPTLPEAVKEAALAVAKRAIHF
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgagttacgatctcatcgtcatcggtaccggcccgggcggctatgtctgcgcgatccgc
gcggctcagctcggcatgaaggtgactgtcgttgagaagcgcgccacccacggcggcacc
tgcctcaacgtcggctgcatcccgtcgaaggcgctgctgcatgcctccgagatgttcgag
gaggcgggccacagcttcgccaagatgggcatcggcgtcggcacgccgaagctcgatctg
ccggcgctgctgaagttcaaggacgaggcagtcgacggcaacgtcaagggcgtcgactat
ctgctcaagaagaacaagatcgattcggtgcgcggcaccggcaagatcgcaggccccggc
aaggtcgaggtcaaaggcgccgacggcaagactcaggtgctggagacgaagagcatcgtc
atcgccaccggctcggacgtcgccaagctccgcggcgtcgacaccgacggcaagcgcatc
gtcacctcggacgaggcgatcgcgctgcccaaggtgccgggcaagcttctggtggtcggt
gccggcgtgatcggactcgagctcggctcggtgtggcgcaggcttggcgcgcaagtcaca
gtcgttgaattcctggatcgcatcctgcccggcatggacaacgaagtggcgcggcagtcg
cagcgcctcctggaaaagcagggcatcgtgttcaagctcggctccaaggtgaccggcgtg
aattcgtcgggcgcaacgctcaaggccagcgtggagccggccaaaggcggtgctgcggaa
actctcgacgccgacgtggtgctggtcgcgatcggccgcgtgccgttcaccgaggggctc
ggcctcgacgaggcgggggtgaagaaggacaaccgcggccgcgtcgtcaccgacgcgcat
tttgccaccagtgtgccgggcatctacgccatcggcgacgtgatcgcgggcccgatgctg
gcgcacaaggccgaagacgagggtatggccgcagccgagatcatcgcgggcaaggccggc
cacgtgaactacgatgtgatcccggcggtggtctacacgttcccggagatcgcttcggtc
ggcaagggcgaagaggaactgaaagaagccggcgtcgcctacaatgtcggaaaatttccg
ttcaccgcgaacggccgcgccaaggccaatcagcagaccgacggcttcgtgaaaattctc
gccgacgccaagaccgaccgcgtgctcggcgtgcatatcgtgggttccgacgccggcaac
atgatcgccgaagccgcgatcgcgatggagttcggcgcgtcgtcggaagacattgcgcgc
acctgccatgcccatccgacgctgcctgaagccgtgaaggaagccgcgctcgcggtcgcc
aagcgcgcgattcatttctga
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