Rhodoplanes sp. Z2-YC6860: RHPLAN_05080
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Entry
RHPLAN_05080 CDS
T04290
Name
(GenBank) site-specific recombinase XerD
KO
K03733
integrase/recombinase XerC
Organism
rhz
Rhodoplanes sp. Z2-YC6860
Brite
KEGG Orthology (KO) [BR:
rhz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rhz03036
]
RHPLAN_05080
Chromosome and associated proteins [BR:
rhz03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
RHPLAN_05080
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Phage_integrase
Phage_int_SAM_1
Phage_int_SAM_4
DIMCO_N
Phage_int_SAM_2
HTH_53
YdaS_toxin
Motif
Other DBs
NCBI-ProteinID:
AMN38973
UniProt:
A0A140GVD9
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All DBs
Position
complement(561605..562582)
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AA seq
325 aa
AA seq
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MSSTRRPKASPEPELRAAAPEVAAEMVRWLAQLSNERRMSPKTLDAYGRDVRQFLTFMAE
HLGGAPSLAKLAKLTPQDVRAFMAARRGDDISSRSLMRALAGVRSFARFLERNGKGQVAA
LAAVRAPKVPKTLPKPLHIAAAKQVSDADLRAGEERAPWVLARDAAVLALLYGSGLRISE
ALGLKRGDVPAPGRGDAITVTGKGNKQRMVPLLAQVTQLIADYVAICPYDLPAEGPLFLG
ARGGPLSPRIVQLVMERLRGALSLPDSATPHALRHSFATHLLARGGDLRAIQELLGHASL
STTQIYTAVDTERLLEVYRSAHPRA
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
gtgtcaagcacaagacggcccaaagcttcgcccgagccggaattgcgcgccgcagcgccc
gaggttgcggccgaaatggtgcgctggcttgcgcaactttccaacgagcgccgcatgtca
ccgaagacgctcgacgcttatggccgcgacgtccggcaattcctgaccttcatggcggag
catctgggcggcgcgccgtcgctcgcgaagctcgccaagctcacgccacaggacgtgcgc
gccttcatggcggcgcggcgcggcgatgacatctcaagccgctcgctgatgcgggcattg
gccggcgtgcgatcgttcgcgcgctttctcgagcggaacggcaagggccaggtcgctgca
cttgctgccgtgcgagctccgaaggtgccgaagaccctgcccaagccgctgcacatcgca
gccgccaagcaggtgtcggatgccgacctccgtgccggcgaggagcgcgcgccgtgggtg
ctggcgcgcgacgccgcggtgctggcgctgctctacggcagcgggcttcgcatctcggag
gcgttagggctcaagcgcggcgatgtccccgcaccgggacgcggcgacgccatcacggtg
accggcaaaggcaacaagcagcgcatggtgccgctgctggcgcaagtcacgcagctcatt
gccgattacgtcgcgatctgcccctatgatcttccggccgaaggcccgctgttcctgggc
gcccgcggcgggccgctgtcaccgcgcatcgtacaacttgtcatggaacggttgcgcggc
gcccttagcctgccggattcggcgacgccgcacgcattgcggcattcctttgccacgcat
ctcctggcgcgaggcggcgaccttcgcgccatccaggaattgctcggccatgcgtcgctg
tcgacgacgcagatttatacggctgttgacactgagcgtctgctcgaagtctaccgcagc
gcccatccccgggcatga
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