Rhodoplanes sp. Z2-YC6860: RHPLAN_13070
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Entry
RHPLAN_13070 CDS
T04290
Name
(GenBank) type I secretion system ABC transporter, PrtD family
KO
K12536
ATP-binding cassette, subfamily C, type I secretion system permease/ATPase
Organism
rhz
Rhodoplanes sp. Z2-YC6860
Pathway
rhz02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
rhz00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
RHPLAN_13070
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rhz02000
]
RHPLAN_13070
02044 Secretion system [BR:
rhz02044
]
RHPLAN_13070
Transporters [BR:
rhz02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
RHPLAN_13070
Secretion system [BR:
rhz02044
]
Type I secretion system
Multiple protein transporter
RHPLAN_13070
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
SMC_N
nSTAND1
AAA_16
Motif
Other DBs
NCBI-ProteinID:
AMN39762
UniProt:
A0A127END2
LinkDB
All DBs
Position
complement(1518943..1520823)
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AA seq
626 aa
AA seq
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MRPVWSAKTKQQNDRTPAAPDPTRTLPIEFWEQVRLLLQPFRDGVGTPAPTSQPGGTPKS
ELRQALSACRSAFIGVAAFSGLINILMLTGSLFMLEVYDRVLPSRSVPTLVGLIVLASAL
FGFQALLEITRGRLLVRVGNHLDYVLSPRIFDLIVQLPLRAKPTEAQPIRDIEAVRSFLS
STGPTALFDMPWVPFYLFICFAFHTMIGVTALIGAIILICLTVATDVLSRNAIKGAAQQG
AQRNRLAETGRRNAEVLVAMGISDRLLARWRTSTGQYLSLQRRANDVSGGFGATGRVLRM
MLQSGVLAMGAYLVIQGEATAGIIIASSILTGRALAPVDLSIANWKGFVNARQSWRRLEQ
LLKNLPPQPKKLQLPAPTQALTVETLMVAPPGAQKTSVQEVSFTLRAGNALGVIGPSASG
KSSMARALVGVWRPMRGAVRLDGASLDQWSAGALGQHIGYLPQGVELIEGSIAENIARFD
PDASPEAIVAAAKAAGVHDMIVGLPSGYETPIGEQGTNLSAGQQQRVALARALYGDPFLV
VLDEPNSNLDSEGEEALTKAILGVRARGGIVIVIAHRPSALAAVDLVLVMARGTQQAFGP
KDDVLSKVLRREQAAVPAPLKMAQGG
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
gtgcgtcccgtgtggtctgcaaaaaccaaacaacaaaacgaccgaactcccgccgctcct
gatccaacacgcacgctgccaatcgaattctgggaacaggtcaggctcttgcttcagccg
tttcgggacggagttggaactccggcaccgacctctcaacccggcggcacaccgaaatcg
gaactgcgccaggcgctcagcgcctgtcgcagtgccttcatcggcgtcgcagccttcagc
ggcctgatcaacatcctgatgctgacgggctcgctgttcatgctcgaagtgtacgaccgg
gtgctgccgagccgcagcgttccaacgctcgtgggcctcatcgtgctggcatcggcgctg
ttcgggttccaggcactgctcgagatcacgcgcggccgcctcctggtccgggtcggcaat
catctggattatgtgctgagcccgcggatcttcgatctgatcgtccagctgccgctgcgc
gcgaagcccaccgaagcgcagccgatccgcgatatcgaagcggtgcgctcatttctctcc
agcaccggccccacggcgctgttcgatatgccctgggttccgttctatctcttcatctgc
ttcgcattccacaccatgatcggcgtcacggcactgatcggcgcgatcatcctgatctgc
ctgacggtcgcgaccgacgtgctgtcgcgtaacgcgatcaagggcgccgcgcagcagggc
gcgcaacgcaaccggctggccgagaccggccggcggaatgccgaagtgctggtcgccatg
ggcatctcggatcggctgctggcgcgctggcggacctcgaccggtcaatatctgtcgctg
cagcgccgcgccaacgacgtttccggcggcttcggcgccaccggccgcgtgctgcgcatg
atgctgcaatcgggcgtgctcgccatgggcgcttatctggtgatccagggcgaggcgacg
gccggcatcatcatcgcgagctcgatcctgaccggccgcgcgctcgcaccggtcgatctg
tcgatcgccaactggaaaggcttcgtcaacgcccgccaaagctggcgccggctggagcag
ttgctcaagaacctcccgccgcagccgaagaagctgcagcttccggcgccgacccaggcg
ctgaccgtcgaaactctgatggtggcgccacccggcgctcagaaaacttcggtgcaggag
gtgtccttcacgctccgcgccggcaatgcgctcggtgtcatcgggccaagcgcgtccggc
aagtcctcgatggcgcgcgcgctggtcggcgtgtggcgtccgatgcgcggcgccgtccgc
cttgacggcgcgtcgctcgaccaatggtccgcaggcgcgctcggccagcacatcggttac
ctgccgcaaggcgtcgagctgattgagggttccatcgccgagaatatcgcccgcttcgat
ccggatgcatctccggaggccatcgtggctgccgcgaaagcggccggcgtgcacgacatg
atcgttggcttgccgtccggctacgaaaccccaatcggcgagcagggcaccaacctgtcg
gccggccagcagcagcgcgtggcgctggcgcgcgcgctttacggcgacccgttcctggtg
gtgctcgacgagccgaactccaatctcgacagcgaaggcgaggaggcgctgaccaaggcg
atccttggcgtgcgggcgcgcggcggcatcgtcatcgtgatcgctcaccggccgagcgcg
ctcgccgcggtcgatctggttctggtgatggcgcgcggcacccaacaggcgttcggcccc
aaagatgacgtgctgtccaaggtgttgcggcgcgagcaggctgccgttccggcgccgctc
aagatggcgcaaggcggatga
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