Rugositalea oryzae: RHPLAN_13280
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Entry
RHPLAN_13280 CDS
T04290
Name
(GenBank) NADH-ubiquinone oxidoreductase chain F
KO
K22515
formate dehydrogenase beta subunit [EC:
1.17.1.9
]
Organism
rhz
Rugositalea oryzae
Pathway
rhz00630
Glyoxylate and dicarboxylate metabolism
rhz00680
Methane metabolism
rhz01100
Metabolic pathways
rhz01120
Microbial metabolism in diverse environments
rhz01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
rhz00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
RHPLAN_13280
09102 Energy metabolism
00680 Methane metabolism
RHPLAN_13280
Enzymes [BR:
rhz01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
RHPLAN_13280
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Motif
Pfam:
Complex1_51K
2Fe-2S_thioredx
NADH_4Fe-4S
SLBB
SLBB_2
Motif
Other DBs
NCBI-ProteinID:
AMN39783
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Position
1543588..1545312
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AA seq
574 aa
AA seq
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MNVQNPPPRIGGNGAEPRRRKARRTPKGRQVDPQALAEVQALLIDRSRKRDLLIEHLHLI
QDKYGHISAAHLAALAFEMRLAQTEVYEVATFYAHFDVVKEGDTAPPPVTVRVCDSLSCA
MAGAEHLLNDLPKLLGTGVRVVRAPCMGACDHAPVCAVGHVQVNRANNEAVKKLATPNTH
AHALKPGTDFDGYRANGGYKLFEEALAGKRTRDEFIKTVSDAGLRGLGGAGFPTGRKWQF
VRAEKGPRLMAVNGDEGEPGTFKDRHYLGLDPHRFLEGMLIAAWVVEAAEVYIYLRDEYP
EIRLMLEQEIEKLEAAGLDSYTRIHMRRGAGAYICGEESAMIESIEGKRGLPRHRPPYVA
QVGLFGRPTLEQNVETLYWVRDIIEKGSAWVTSQGRHERKGFRSFSVSGRVKNPGVKLAP
AGITMRELIEEHCGGMADGETFKAYLPGGASGGILPASMADEPLDFGTLEKYGCFVGSHA
VVILSEKDDIKAVALNLMRFFEDESCGQCTPCRVGTEKAAKLMEQGPWNEALLNELSTLM
RDASICGLGQAAPNPLLCVLKFFPDELKKPLGRW
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtccagaatccgccgccgcgcatcggcggcaatggcgcggaaccgcgccgccgc
aaagcccgccgtacccccaaaggccgccaggttgatccgcaggcgcttgccgaggtccag
gcgctgctcatcgaccgttcgcgcaagcgcgatctcctgatcgagcatctgcatctgatc
caggacaaatacgggcacatctcggcggcgcatcttgcggcgctcgccttcgagatgcgg
ctcgcccagaccgaggtctacgaggtcgcgaccttctacgcgcatttcgacgtggtgaag
gagggcgacaccgcgccgccgccggtcacggtgcgggtgtgcgattccctctcatgcgcg
atggccggcgcggagcatctcctgaacgacctgccgaagctgctcggcaccggtgtgcgc
gtggttcgcgcgccctgcatgggcgcctgcgatcatgcgccggtttgcgccgttggccat
gtgcaggtgaacagggcgaacaacgaggcggtgaaaaagcttgcgacgccgaacacgcac
gcccatgcgctgaagcccggcaccgatttcgacggctatcgcgcgaacggcggctacaag
ctgttcgaggaagcgttggccggcaagcgcacgcgcgacgagttcatcaagaccgtcagc
gacgcggggctgcgcggcctcggcggcgcgggttttccgaccggccgcaagtggcagttc
gtccgcgccgaaaaaggtccgcggctgatggccgtgaacggcgacgagggcgagcccggc
accttcaaggaccggcactatctcggcctcgacccgcaccgtttcctcgaaggcatgctg
atcgctgcctgggtggtcgaagccgccgaggtctacatctatctgcgcgacgagtatccc
gagatccggctgatgctggagcaggagatcgagaagctagaagccgcgggcctcgacagc
tacaccagaatccatatgcgccgcggcgccggcgcttacatctgcggcgaagaatcggcg
atgatcgaatcgatcgaaggcaagcgcggcctgccgcgccaccgcccgccctacgtcgcg
caggtcggtctgttcggccgcccgacgctcgagcagaacgtcgagacgctctattgggtc
cgcgacatcatcgaaaagggctccgcatgggtgacctcacagggccgccatgagcgcaag
ggctttcgcagcttctcggtgtcgggccgggtgaagaaccccggcgtcaagctcgcaccg
gccggcatcaccatgcgcgagctcatcgaggagcactgcggcggcatggcggacggcgaa
acgttcaaggcctatctgccgggcggtgcgtcaggcgggattcttccggcctcgatggcc
gatgagcccctcgacttcggcacgctggaaaaatacggctgtttcgtcggttcccacgcg
gttgtgatcctgtcggagaaggacgatatcaaggctgtggcgttgaatctgatgcggttc
ttcgaggatgaaagctgcggccagtgcacgccctgccgcgtcggcaccgaaaaggccgcc
aagctcatggagcaggggccgtggaacgaggcgctgctcaacgagctgtcgacgctgatg
cgcgatgcttcgatctgcggcctcggccaagccgcgccgaacccgctgctctgcgtgctg
aaatttttccccgacgagctgaagaagccgttggggcgttggtga
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