Rugositalea oryzae: RHPLAN_13390
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Entry
RHPLAN_13390 CDS
T04290
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
rhz
Rugositalea oryzae
Pathway
rhz03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rhz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
RHPLAN_13390
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhz03400
]
RHPLAN_13390
Enzymes [BR:
rhz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
RHPLAN_13390
DNA repair and recombination proteins [BR:
rhz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
RHPLAN_13390
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
FANC_SAP
Motif
Other DBs
NCBI-ProteinID:
AMN39794
LinkDB
All DBs
Position
1556594..1557391
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AA seq
265 aa
AA seq
DB search
MKIATFNINNVNKRLPNLRAWLMSARPDVVCLQELKCTDAEFPSGAIEDSGYHAVWKGQK
TWNGVAILSRVGAPVLTRTALPGDAADTEARYIEAAVQGVLIGCLYLPNGNPQPGPKFDH
KLRWFKRLHQHAGKLLREKVPAVLAGDYNVAPTEIDIYPTKSWDDDALVQPESRAAYARL
VKQGWTDALRETHPGERVYTFWHYMRHRFERDAGLRLDHLLLSPELADRLSSAGVDRAVR
GAPNASDHAPVWIELRAPGGGRKRR
NT seq
798 nt
NT seq
+upstream
nt +downstream
nt
gtgaagatcgcgaccttcaacatcaacaacgtcaacaagcgtctgccgaacctgcgcgcc
tggctgatgtcggcgcggccggatgtggtctgccttcaggagttgaaatgcaccgacgcg
gagtttccgtcgggagccatcgaggattccggctaccacgccgtctggaagggacagaag
acctggaacggcgttgcgatcctctcgcgcgtcggcgcaccggtgctgaccaggacggcg
ctgcccggcgacgcggccgataccgaagcgcgttacatcgaagcggccgttcaaggggtt
ctgatcggctgtctctatctgcccaatggcaatccgcagcccggtccgaagttcgaccac
aagctgcggtggttcaagcggttgcatcagcacgccggaaagctgttgcgggaaaaggtg
cctgccgtgctggccggcgactacaatgtcgcgccgaccgagatcgacatctacccgacc
aagtcctgggacgacgatgcgctggtgcagcccgagagccgggccgcttatgcgcggctc
gtcaagcagggctggaccgacgcactccgcgaaacccatccgggcgagcgcgtctacacg
ttctggcactacatgcgccaccgcttcgagcgcgatgcgggcctgcgtctcgaccatctg
ctgctgagcccggagctcgccgaccgtctaagcagcgccggcgtcgaccgcgcggttcgc
ggcgcgccgaatgccagcgatcatgcgccggtctggatcgaactgagggcgccgggcggc
ggaaggaagcggcggtaa
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