Rugositalea oryzae: RHPLAN_24720
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Entry
RHPLAN_24720 CDS
T04290
Name
(GenBank) tRNA nucleotidyltransferase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
rhz
Rugositalea oryzae
Pathway
rhz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rhz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RHPLAN_24720
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rhz03019
]
RHPLAN_24720
Enzymes [BR:
rhz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
RHPLAN_24720
Messenger RNA biogenesis [BR:
rhz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
RHPLAN_24720
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_RNAbd
tRNA_NucTran2_2
Motif
Other DBs
NCBI-ProteinID:
AMN40910
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Position
2856416..2857666
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AA seq
416 aa
AA seq
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MSDTQPLLKDAVWLRQGVLAHLIAVLSEGGEEARVVGGAVRNALLGEPIGDIDIATTVLP
DEVMRRTAAAYFKPVPTGIEHGTVTVVIDGQPFEVTTLREDVETFGRHATVHFGRDWRKD
AERRDFTMNALSASGDGAVHDHVGGIADLRAHRVRFIGDAATRIAEDHLRILRFFRFHAA
YGHGLPDRDGLKACIAARGSLDQLSRERVRMEMLKLLVARHAAPVLAVMAESGLLGSILG
GVVDLAAFENLAKIETVLRLAADPVRRLGALATRVAEDAERLWQRLRLSNAEHERIESMS
ELWWRISPANDKAARVLLYRTGPARYVDRVLMAWAHSPAGARDEAWRALSALPARWTAPA
FPIKAAELIARGVPHGPAVGIALRKAEEAWIEAGFPADQSTLADIAAAAVQAATQR
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgacacgcagcctttgctgaaagacgctgtctggctgcggcagggtgttcttgcg
cacctgatcgcggtcttgagcgagggcggcgaagaggcgcgcgtggtgggcggcgcggta
cgcaacgcgctgctcggcgagccgatcggggacatcgacattgccaccacggttttgccc
gacgaggtgatgcgccgcacggcggccgcgtacttcaagccggtgccgaccggcatcgaa
catggcaccgtgacggtcgtgatcgacggtcagccgttcgaggtgacgaccttgcgcgag
gacgtcgagaccttcggccgccacgccactgttcacttcggccgtgactggcgcaaggac
gccgagcgccgcgacttcacgatgaacgcgctgtcggcttcgggcgacggcgcagtgcat
gaccatgtcggcggcatcgccgatctcagagcgcaccgcgtgcggttcatcggcgatgcc
gcgacccgcatcgccgaagatcacctgcgcattctgcgcttcttccgttttcacgccgct
tacggccatggcctgccggaccgtgacggcctcaaggcctgcatcgcggcacgaggaagc
ctcgatcaattgtcacgcgagcgggtgcggatggagatgctcaagctgctcgtcgcgcgg
cacgcggctcccgtgctcgccgtgatggccgagagcggcctgctcggttcgatcctcggc
ggtgtcgtcgatctcgcagccttcgagaatctggccaagatcgaaaccgtgctgcgcctt
gccgccgatccggtgcgcaggctcggggcgctcgcgacgcgggtcgccgaagacgccgag
cggctgtggcagcggctccgtctgtccaacgccgagcatgagcgcatcgaatcgatgagc
gaactctggtggcgcatatcgcccgcgaacgacaaggccgcgcgcgtgctgctctatcgc
accggtccggcgcgctatgtcgaccgggtgctgatggcctgggcgcattcgccggcgggc
gccagagacgaagcctggcgggcgttgtctgcgctgcctgcgcgctggaccgcgccggcc
tttccgatcaaggcagccgagttgatcgcccgcggtgtgccgcacggcccggccgtgggc
attgcgctgcgcaaggccgaggaagcctggatcgaggcgggtttccccgccgatcagtcc
acgctcgcggatattgccgccgcggcagtgcaggcggccacccagcgctga
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