Rugositalea oryzae: RHPLAN_27370
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Entry
RHPLAN_27370 CDS
T04290
Name
(GenBank) spermidine/putrescine ABC transporter ATPase
KO
K02052
putative spermidine/putrescine transport system ATP-binding protein
Organism
rhz
Rugositalea oryzae
Pathway
rhz02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rhz00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RHPLAN_27370
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rhz02000
]
RHPLAN_27370
Transporters [BR:
rhz02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
RHPLAN_27370
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GFIT
Motif
Pfam:
ABC_tran
TOBE_2
AAA_21
AAA_22
AAA
AAA_16
nSTAND3
RNA_helicase
Rad17
nSTAND_NTPase5
AAA_25
ORC-CDC6-like
AAA_5
Motif
Other DBs
NCBI-ProteinID:
AMN41174
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Position
3187140..3188219
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AA seq
359 aa
AA seq
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MSDVLLEQVRKAYGGVVAVRGVDLRVAPGEFVTLLGPSGCGKTTCLRMVAGFVEPDTGRI
LIGGKDVTHVPPYRRNTGMVFQSYALFPHLTVAANIAFGMQMRGVGRSDADQRTKEALRL
VQLEALAGRYPAELSGGQKQRVALARAVVIRPQVLLLDEPLGALDLKLREELQVEIKRVQ
SALGITTLFVTHDQGEALGMSDRVAVMRGGEIVQIDTPTALYERPNSMYVANFVGRTNLI
EVVLKDREGDSMRVEANGATFSVAGPQDAAFSVGERCLLATRPEHFTIGLGGGNVLTANV
LDVSYRGSIWNVELSGPRNESLNAQVRSGQPVPQKGEAVTLSFPPARCFLLKMEQPRAS
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacgttcttctggagcaggtgcgaaaggcgtacggcggggtcgtcgcggtgcgc
ggtgtcgatctgcgtgtcgcgccaggcgagtttgtcacgctgctcgggccgtccgggtgc
ggcaaaaccacgtgtctccgcatggtggcgggtttcgtggagccggacaccggacgtatt
ctgatcggcggcaaggacgtgacacacgttccgccttatcgccgcaacactggcatggtg
tttcaatcctacgccttgtttccccatctgaccgtcgctgcgaatattgcgttcggcatg
cagatgcgcggcgtcgggcgcagcgatgccgatcagcgcaccaaggaggcgctgcggctg
gtgcaactggaggcgctcgccgggcgctatccggctgagctctccggcggccagaagcag
cgtgtcgcgctcgcccgcgccgtggtgatcaggccgcaggtgctgctgctcgacgagccg
cttggcgcgctcgatctcaagctgcgcgaggaattgcaggtcgagatcaagcgggtgcag
tcggcgctcggcatcacgaccttgttcgtgacgcacgatcagggcgaggcgctcgggatg
tccgatcgagtggcggtcatgcgcggcggggagatcgttcagatcgatacgccgacagcc
ctgtacgagcggccgaacagcatgtatgtcgcgaacttcgtcggacggaccaatctcatc
gaggtggttttgaaggaccgcgagggtgacagcatgcgcgtcgaggccaacggggcgacg
ttctccgtcgcgggcccgcaagatgcggccttctcggtgggcgagcgctgtctgctggcg
acccggcccgagcatttcacgatcggacttggcggtgggaacgtgctgaccgccaacgtg
ctcgatgtgagctatcgcggcagcatctggaatgtcgaactgtcggggccccgcaacgag
tctttgaacgcccaggttcgctcgggccagccggtaccgcagaagggcgaggcggtgacg
ctctcctttccgcccgcgcgctgcttccttctcaaaatggaacagcctcgcgcctcttaa
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