Rugositalea oryzae: RHPLAN_28060
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Entry
RHPLAN_28060 CDS
T04290
Name
(GenBank) ABC transporter ATP-binding protein/permease
KO
K01995
branched-chain amino acid transport system ATP-binding protein
K01998
branched-chain amino acid transport system permease protein
Organism
rhz
Rugositalea oryzae
Pathway
rhz02010
ABC transporters
rhz02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rhz00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
RHPLAN_28060
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RHPLAN_28060
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rhz02000
]
RHPLAN_28060
Transporters [BR:
rhz02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
RHPLAN_28060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_2
ABC_tran
BCA_ABC_TP_C
AAA_21
AAA_30
AAA_23
AAA_29
MMR_HSR1
RsgA_GTPase
MeaB
SMC_N
AAA_22
AAA_19
KAP_NTPase
AAA_15
Motif
Other DBs
NCBI-ProteinID:
AMN41243
LinkDB
All DBs
Position
3266036..3267802
Genome browser
AA seq
588 aa
AA seq
DB search
MRWHSFIVLAAIIAFIAVAPALFGTFTITLMNYIGIYAIAALGLVLLTGVGGLTSFGQAA
FVGIGAYATAWYTAVQGGSPWIGLALGLALTGIVATVLGAATLRLGGHFLPLSTIAWGIA
IYFVFGNLDALNRYSGLSGIPPIALGPFVLGSTVSIYYFIWLVLGAVMLLCHNLLDSRQG
RAIRGLRGGAAMVESFAVDFFRMRLAIFVLAGLLAGLSGWLFAHMQRFVDPNPFNIKPGI
ELLFMALVGGTGQIAGAVVGSTIIVLLKNILQDVLPSITRYNAQMEAVLFGILFVVLLQK
ARGGVWPLIRRLLPRNPQTKPAEAPSLPVRARAAAADRPVLRIDSAIKRFGALAALNGVS
FEVWPGQVVGLIGPNGAGKSTILNLITGTLKPNGGSIAFLGDDVTGLPPRRMAAKGMART
FQHVKLRPNMTLLDNVLLGTYPRTRTGFFAGALRLDRSEERSARAEALRQLQRVGLGEKF
GDIAGNLPLGQQRLLEVARALATDPVLMILDEPAAGLRALEKRTLSDLLRGLRSEGMTIV
LVEHDMDFVMNLVDRIVVMDFGAKLAEGLPAEIRADARVQEAYLGGVA
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atgcgttggcactccttcatcgtgctcgccgcgatcatcgctttcatcgcggtcgcgcca
gcgctgttcggcaccttcaccatcacgctgatgaattacatcggcatctacgccatcgcg
gcgctcggcctcgtgctgctcaccggagtgggcgggctcacctcgttcggccaggcggcc
ttcgtcggaatcggcgcctatgccaccgcctggtacacggccgtgcagggcggctcgccg
tggatcggcctcgcactcgggcttgcgctcaccggtatcgtcgcgaccgtgctgggcgcg
gcgaccttgcggctcggcggacatttcctgccgctctccaccatcgcctggggcatcgcg
atctatttcgtgttcggcaatctcgacgcgctcaaccgctacagcgggctctccggcatt
ccgccgatcgcgctcggaccgttcgtactcggcagcacggtctcgatctactatttcatc
tggctcgtgctcggcgccgtgatgctgctctgtcacaaccttttggattcgcggcagggt
cgcgcgatccgcggcttgcgcggcggtgctgccatggtcgagagctttgcggtcgacttt
ttccgcatgcggctcgcgatcttcgtgctggccggactgctcgcaggcctctcgggctgg
ctgttcgcgcacatgcagcgcttcgtcgatcccaacccgttcaacatcaagcccggtatc
gagctcctgttcatggccctggtcggcggcaccggccagattgccggcgcggtggtcggc
tcgaccatcatcgtgctgctgaagaatattctccaggacgtgctgccttcgatcacgcgc
tacaacgcgcagatggaagccgtgctgttcggcattctgtttgttgtgttgctgcagaaa
gcccgaggcggcgtctggcccctgatccgccgcctgctgccgcgcaacccgcaaacgaag
cctgcagaggcgccgtcgctgccagtgcgggctcgtgccgcggcggctgatagacctgtg
ttgcggatcgacagcgccatcaaacggttcggcgcattggccgcgctcaatggcgtgagc
ttcgaggtgtggcccggccaggtcgtcggcctgatcggcccgaacggtgccggcaagagc
acgatcctcaacctgatcacgggcacgctgaagccgaacggcggcagcatcgctttcctc
ggcgacgacgtgacgggcctgccgccgcgtcgtatggccgccaagggcatggcgcggacc
ttccagcacgtgaagcttcgcccgaacatgacgctgctcgacaacgtgctgctcggcact
tacccccgaacccggacaggctttttcgccggtgcactgcgccttgatcgaagcgaagag
cgctcggcgcgagcagaggcgctgcgccagctgcagcgtgtgggccttggcgagaaattc
ggcgacatcgcgggcaacctgccgctcggccaacagcgcctgttggaggtcgcgcgcgcg
ctcgcgaccgatccggtgctgatgatcctggatgagccggccgcgggccttcgcgcgttg
gagaagcggacgctgtccgatctcctgcgcggcctgcgcagcgagggcatgaccatcgtg
ctggtcgagcacgacatggacttcgtcatgaatctcgtcgaccgcatcgtggtgatggat
ttcggcgccaagctcgccgagggcctgccggccgagattcgcgccgatgcgcgggtgcag
gaagcctatttgggcggtgtcgcatga
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