Rhodoplanes sp. Z2-YC6860: RHPLAN_34970
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Entry
RHPLAN_34970 CDS
T04290
Name
(GenBank) DNA gyrase, subunit A, type II topoisomerase
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
rhz
Rhodoplanes sp. Z2-YC6860
Brite
KEGG Orthology (KO) [BR:
rhz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rhz03032
]
RHPLAN_34970
03400 DNA repair and recombination proteins [BR:
rhz03400
]
RHPLAN_34970
Enzymes [BR:
rhz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
RHPLAN_34970
DNA replication proteins [BR:
rhz03032
]
Prokaryotic type
DNA Topoisomerases
RHPLAN_34970
DNA repair and recombination proteins [BR:
rhz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
RHPLAN_34970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
AMN41929
UniProt:
A0A127EXG3
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Position
4077807..4080554
Genome browser
AA seq
915 aa
AA seq
DB search
MADAENPPGGPSSSDVRPISITDEMKRSYLDYAMSVIVSRALPDVRDGLKPVHRRILYSM
YEQGHTPDKKYVKSARVVGDVMGKYHPHGDSAIYDALVRMAQDFSMRLMLIDGQGNFGSV
DGDAAAAMRYTECRLAKSAMVLLNDIDEDTVNFQDNYDGNEHEPVVLPARFPNLLVNGAG
GIAVGMATNIPPHNLGEVIDACIALINDPALTIDSLIKIVPGPDFPTGGIILGRAGITSA
YHTGRGSVVMRGKVEIETIRKEREAIVISEIPYQVNKATMIERMAELVREKKIEGIAELR
DESDRDGYRVVIELKREAMPDVVLNQLYRFTPLQTSFGCNMVALDGGRPLLMNLRDMLTA
FVAFREEVVSRRTKFRLNKARDRAHILVGLAIAVANIDEVIKLIRAAKDANEAREQLMAR
DWPARDVEALLKLIDDPRHRMTEAGTYRMSAEQAKAILDLRLQRLTALGRDEIKDELDKL
AAEISDYLDILRSRARIQSIVKEELVAVKDEFATPRRTVIVEQEGEVEDEDLIQREDMVV
TVSHLGYVKRVPLSTYRMQRRGGKGRSGMQTRDEDFVARLFVASTHTPVLFFSSKGRVYK
EKVWRLPLAAPQARGKPLINILPIEQGERMTSILPLPEDESTWGNLDVMFSTTKGTVRRN
KLSDFVDVRRSGIIAMKLDEGEGILDVQVCTERDDVLLTTAQGQCIRFAVTDVRVFSGRT
SMGVRGINLAEGDRVISQSILRHLDVSSEERVAYLKRANAVRRAAGDEEEATIDAEEAAA
PAIELGEQRYVEMSAAEQFILTVSERGYGKRSSSYEYRITGRGGKGLVAMAIWEGKKGEE
TIKEKIGQLVASFPVEEADQIMLVTDGGKLIRTPVDGIRIAGRSTQGVIVFNTADDEKVV
SVERIGEEGEENGGN
NT seq
2748 nt
NT seq
+upstream
nt +downstream
nt
ttggccgacgctgaaaacccgcccggcggtccctcgtcgtctgacgttcgcccgatctcc
atcaccgacgaaatgaagcgcagctatctcgattacgccatgagcgtgatcgtgtcgcgc
gcgctgccggacgtgcgcgacgggctcaagcccgtgcaccgccgcatcctctactcgatg
tacgagcagggccatacgcccgataagaaatacgtgaagtcggcccgtgtggttggcgac
gtgatgggcaaataccatccgcatggcgacagtgcgatctacgacgcgctggttcgcatg
gcgcaggatttctccatgcgcctgatgctgatcgacggtcagggcaacttcggctcggtc
gacggcgatgccgcagcggcgatgcgttacaccgagtgccgtcttgccaagtcggcgatg
gtgctgctcaacgacatcgacgaagacaccgtcaatttccaggacaactacgacggcaat
gaacatgagccggtggttctgccggcgcgctttcccaatctcctggtcaacggcgccggc
ggcatcgcggtcggcatggcgaccaacatcccgccgcataatctgggcgaagtcatcgac
gcctgcattgcgttgatcaacgatccggcgctgacgatcgacagcctgatcaagatcgtg
ccggggccggactttccgaccggcggcatcatcctcggcagggccggcatcaccagcgcc
taccacaccggccgcggttccgtcgtgatgcgcggcaaggtcgagatcgaaacgatccgc
aaggagcgcgaggcgatcgtcatctcggagatcccgtaccaggtgaacaaggccacgatg
atcgagcgtatggccgaactggtgcgcgagaagaaaatcgaaggcatcgccgaactgcga
gatgagtccgaccgcgacggctatcgcgtcgtgatcgagctcaagcgcgaagcgatgccg
gacgtggtgctgaaccaactctatcgctttaccccgctgcagacctcgttcggctgcaac
atggtggcgctcgacggcggccggccgctgctgatgaacctccgggacatgctcaccgcc
ttcgttgcgtttcgcgaagaggtggtgtcgcggcgcaccaagttccggctcaacaaggcg
cgcgaccgcgcccatatcctggtcggtctcgccatcgcggtcgccaacatcgacgaggtg
atcaagctcatccgtgccgccaaggacgccaacgaagcgcgcgagcagttgatggcccgc
gactggccggcccgcgacgtcgaggcgctgctcaaactaatcgacgatccccgtcaccgc
atgacggaagccggcacctaccgcatgtcggccgagcaggccaaggcgatcctcgatctg
cgcctgcagcgcctgacggcgctcggccgcgacgagatcaaggacgagctcgacaaactc
gcggccgagatttccgactatctcgacatcctgcgctcgcgcgcgcgaatccagtcgatc
gtcaaggaagagctcgtggcggtgaaggacgagttcgcgacgccgcgccgcacggtcatt
gtcgagcaggagggtgaggtcgaggacgaggacctgatccagcgcgaggacatggtggtg
acggtgtcccatctcggctacgtcaagcgcgttccgctctcgacctaccggatgcagcgc
cgcggcggcaaaggccgctccggcatgcagacgcgcgatgaggatttcgtggcgcggctg
ttcgtggcttcgacgcacacgccggtgctgttcttctcgtcgaagggccgcgtctacaag
gagaaagtctggcgcttgccattggccgcgccgcaggcgcgcggcaagccgctgatcaac
attctgccgatcgagcagggcgagcgcatgacctcgatcctgccgctgccggaggatgag
agcacctggggcaatctcgacgtgatgttctcgaccaccaagggaacggtgcgccggaac
aagctgtcggacttcgtcgatgtgcgccgctccggcatcatcgccatgaagctcgacgag
ggcgagggcatcctcgacgtgcaggtctgcaccgagagggacgacgtgctgctcaccacg
gcgcagggccagtgcatccgcttcgcggtgaccgacgtgcgcgtgttctcgggccgcaca
tcgatgggtgttcgcggcatcaatctcgccgaaggcgaccgcgtgatctcgcaatcgatc
ctgcgccatctcgacgtcagctccgaagagcgtgtggcctacctcaagcgcgccaatgcg
gtgcgccgcgccgctggcgacgaagaggaggcgacgatcgatgccgaggaggcggcagcg
ccggccatcgagctcggcgagcagcgctatgtggagatgtcggcagctgagcagttcatt
ctcaccgtctcggagcgcggttacggcaagcgctcgtcgtcctacgaataccggatcacc
ggccgcggcggcaaaggcctcgtcgccatggcgatctgggagggcaagaagggcgaggaa
acgatcaaggagaagatcggtcagctcgtcgcttcgttcccggtcgaggaggccgaccag
atcatgctggtcaccgacggcggcaagctcatccgcaccccggtcgacggcattcgcatt
gccggccgctcgacgcagggcgtgatcgtgttcaacaccgccgacgacgagaaggtcgtc
tcggtcgaacgcatcggcgaagagggcgaggagaacggcggcaactag
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