Rhodoplanes sp. Z2-YC6860: RHPLAN_36930
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Entry
RHPLAN_36930 CDS
T04290
Name
(GenBank) Ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
rhz
Rhodoplanes sp. Z2-YC6860
Brite
KEGG Orthology (KO) [BR:
rhz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rhz03019
]
RHPLAN_36930
03009 Ribosome biogenesis [BR:
rhz03009
]
RHPLAN_36930
03036 Chromosome and associated proteins [BR:
rhz03036
]
RHPLAN_36930
Enzymes [BR:
rhz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
RHPLAN_36930
Messenger RNA biogenesis [BR:
rhz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
RHPLAN_36930
Ribosome biogenesis [BR:
rhz03009
]
Eukaryotic type
90S particles
RNase
RHPLAN_36930
Prokaryotic type
rRNA processing factors
RHPLAN_36930
Chromosome and associated proteins [BR:
rhz03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
RHPLAN_36930
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
DND1_DSRM
Motif
Other DBs
NCBI-ProteinID:
AMN42125
UniProt:
A0A127EXT1
LinkDB
All DBs
Position
4299641..4300558
Genome browser
AA seq
305 aa
AA seq
DB search
MSRRGAKSDNASKTAQRDSERAASTTSVTKSADSKAAQAKAAETKAESKSAEDTPADVKL
VRRKRTNRGLRQRSESASALEKTIEYRFKDRDLLERSLTHISAMAGGSRANSYQRLEFLG
DHVLGLIISDMLFQSFVKADEGELSRRLADLVRRETCADVAREMQLGEAIRLGASEANAG
GRTRTAILADVCEAVIGAVYLDGGFPASVKLVEKFWGERMRVPAKPLRDPKTMLQEWAQA
RSLPTPAYKEVERTGPHHSPVFRISVTLPDREPAEGIGRSKRSAEQAAAEALLKLVGVLT
DRPNA
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgagcaggcgaggggcgaagtcagacaacgcatccaaaacggcgcaacgcgacagcgaa
cgcgccgcatcgacgacgtcggttaccaagtccgcggacagcaaagccgcgcaagcaaaa
gccgctgagaccaaagctgagagcaagtccgcggaagacacgcctgcggacgtcaaactc
gtccggcgcaaacgaacaaaccgcgggctgcgacagcgatcggaatcggcgtctgcgctg
gaaaagaccatcgaatatcgcttcaaggaccgcgacctgcttgagcgttcgttgacgcat
atttccgcgatggccggaggcagccgtgccaattcctatcagcggctggaattcctcggc
gaccatgtgctggggctgatcatctcggacatgctgtttcagtccttcgtcaaggccgac
gaaggcgaactgtcgcggcggctcgccgatctcgtccgccgcgagacctgcgcggatgtg
gcgcgcgagatgcaacttggtgaggcgatccggctcggcgcttcggaggccaatgccgga
ggccgcacccgcaccgcgattctggccgacgtctgcgaggcggtgatcggcgcggtctat
ctcgacggcgggtttcccgcttcggtgaaactcgtcgagaaattctggggcgagcggatg
cgcgtgccggcaaagccgctgcgcgatcccaagaccatgctgcaggaatgggcgcaggcg
cgcagcctgccgacgccggcctacaaggaggtcgagcgcactgggccgcaccacagcccg
gtgtttcggatttcggtgactctgccggaccgcgaaccggccgaaggcattggccgatcc
aagcgctcggccgagcaggccgcggcggaagcgctgctcaagctcgtcggcgtactgacg
gatcgtcccaatgcctga
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