Rhodoplanes sp. Z2-YC6860: RHPLAN_40210
Help
Entry
RHPLAN_40210 CDS
T04290
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
rhz
Rhodoplanes sp. Z2-YC6860
Brite
KEGG Orthology (KO) [BR:
rhz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rhz03032
]
RHPLAN_40210
03400 DNA repair and recombination proteins [BR:
rhz03400
]
RHPLAN_40210
Enzymes [BR:
rhz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
RHPLAN_40210
DNA replication proteins [BR:
rhz03032
]
Prokaryotic type
DNA Topoisomerases
RHPLAN_40210
DNA repair and recombination proteins [BR:
rhz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
RHPLAN_40210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Zn_ribbon_Top1
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
AMN42453
UniProt:
A0A127EW25
LinkDB
All DBs
Position
4667037..4669784
Genome browser
AA seq
915 aa
AA seq
DB search
MKVVVVESPAKAKTINKYLGPGYEVLASFGHVRDLPAKDGSVDPEQDFRMLWEVDDKSNK
RLNDIAKAVKGAEKLILATDPDREGEAISWHVLEVLKQKHALKSQPVERVVFNAITKQAV
ADAMKNPRQIDAALVDAYLARRALDYLVGFTLSPVLWRKLPGARSAGRVQSVALKLVSDR
ELEIERFVAREYWSLVAKLATPRNETFEARLVGADGKKIQRLDIGSGQEAEDFKKALETA
AFTVQSVEAKPARRNPYPPFMTSTLQQEASRKFGFAPAHTMRLAQRLYEGIDIGGETTGL
ITYMRTDGVDIAPEAIASARSVIGKDYGPRYVPSSPRQYVTKSKNAQEAHEAIRPTDLTR
RPADVRKLLEPDQAKLYELIWLRTIASQMESAELERTTVDIIAKVAARLLELRATGTVVK
FDGFLTLYNEDQDDKSDEEDANRLPAMSTGEALQKREILASQHFTEPPPRYSEASLVKRM
EELGIGRPSTYASILQVLKDRGYVRLDKKRLIPEDKGRVLTAFLENFFQKYVEYDFTANL
EEQLDLISNNELPYKDVLRDFWRDFMVAISSIKDLRVAQVIDALDEVLAPHLFPPKPDGT
DPRQCPNCGTGKIGLKLGRFGGFIGCSNYPECKYTRQLTAGPDGAGGGMRKLGEDPETKL
EVTVRSGRFGSYLQLGEATKDEDGTAVKPKRASLPKGVSPDEIDLERALKLLALPRVVGK
HPDDGEDIIAGVGRFGPYVKHGKTYANIGADEDILNIGLNRAVTLIEEKKANPGKGRRGA
DPGKQLGEHPQKGGMIVAKNGRYGPYVSHDGVNANLPNDKTPETITLDEAAALIDARPPK
SGGSSARRKRPARGAATATKAAAPKAAPKAKAAPKTTVKAEPKVAAKPKKAAAASTAKAP
SKSKKAKTPKAEAAE
NT seq
2748 nt
NT seq
+upstream
nt +downstream
nt
atgaaagttgtcgttgttgaatcgcctgccaaggccaagacgatcaacaagtacctgggc
ccgggctacgaggtcctggcctcgttcggccatgttcgtgaccttccggccaaggatggt
tccgtcgatcccgagcaggatttccgcatgctctgggaggtcgacgacaagtcgaacaag
cggctcaatgacatcgccaaggcggtcaaaggcgctgagaagctgatcctcgccaccgac
ccggatcgcgagggtgaggcgatctcctggcacgtgctcgaggtgctgaaacagaagcat
gcgctgaagtcgcagccggtcgagcgcgtggtgttcaacgccatcaccaagcaggcggtg
gcggacgccatgaagaacccgcgccagatcgacgcggcgctggtcgatgcgtatctcgca
cgccgcgccctcgattacctcgtgggtttcaccctttcgccggtgctgtggcggaagctt
ccgggcgcccgttcggccggccgggtgcagtcggtcgcgctcaagctcgtctcggaccgt
gagctcgagatcgagcggttcgtcgctcgcgaatactggtcgctggtcgcgaagctcgcg
acgccgcgcaacgaaaccttcgaggcgcgcctcgtcggcgccgacggcaagaagatccag
cggctcgatatcggctccggccaggaggctgaggatttcaagaaggcgctggagaccgcg
gcgttcacggtgcagtcggtcgaggccaagcccgcccggcgcaacccctacccgcctttc
atgacctcgaccctgcagcaggaggcgagccgcaagttcggcttcgcgccggcgcacacc
atgcggctggcgcagcggctctacgagggcatcgacatcggcggcgagaccacgggtctc
atcacctatatgcgtaccgacggcgtcgacatcgcgccggaggcgatcgcctcggcacgc
agcgtgatcgggaaagactacggcccgcgctatgtgccgtcctcgccgcgccagtacgtc
acgaagtcgaagaacgcgcaggaggcccacgaggcgatccgcccgaccgatctcacccgg
cgtcccgccgacgtgcggaagcttttggagccggaccaggccaagctctacgagttgatc
tggctgcgcaccatcgcgagccagatggaatctgccgagctcgagcgcaccacggtcgac
atcatcgccaaggtcgcggcgcgcctgctggagctgcgcgccaccggcaccgtggtgaag
ttcgatggcttcctcacgctctacaacgaggatcaggacgacaagtccgacgaggaagac
gcaaaccgtctgccggcgatgagcaccggcgaggcgctgcagaagcgcgagatcctggcg
agccagcacttcaccgagccgccgccgcgctattcggaagcctcgctcgtcaagcgcatg
gaagagctcggcatcggccggccttcgacctacgcatcgatcctgcaggtgctgaaggac
cgcggctatgtacggctcgacaagaagcggctcattccggaagacaaaggccgggtgctg
accgcgttcctggagaacttcttccagaagtacgtggaatacgatttcaccgccaatctc
gaagagcagctcgacctgatctccaacaacgagctgccctacaaggacgtgctccgcgac
ttctggcgcgacttcatggtcgcgatcagcagcatcaaagatctgcgcgtcgcgcaagtg
atcgacgcgctcgacgaggtgctggcccctcacctgtttccgcccaagcccgacggcacc
gacccgcgccagtgcccgaactgcggcaccggcaagatcgggctcaagctcggccggttc
ggcggcttcatcggctgctcgaactatccggagtgcaagtacacaaggcagctcacggca
ggtcccgatggcgccggcggcggcatgcgcaagctcggcgaggatccggagaccaagctc
gaagtcaccgtgcgctccggccgtttcggcagctatctgcaattgggcgaggccaccaag
gacgaagacggcacggcggtgaaacccaaacgggcgagcctgcccaagggtgtgtcgccg
gacgagatcgatctcgagcgcgccctgaagcttctcgcgctgcctcgtgtggtcggcaag
catccggacgacggcgaggacatcatcgccggcgtggggcgcttcgggccttacgtcaag
catggcaagacctacgccaacatcggcgcggacgaggacattctgaacatcggcctcaac
cgtgccgtgacgctgatcgaagagaagaaggccaatccgggcaagggccggcgcggcgcc
gaccctggcaagcagctcggcgagcatccgcagaagggcggcatgatcgtcgccaagaac
ggccgctacgggccttacgtgagccacgacggcgtcaacgccaacctgccgaacgacaag
acgccggagaccatcacgctcgacgaggcggcggcgttaatcgacgcccgccccccgaag
agcggcgggtcgagcgcgcggcggaagcgtccggcccgtggcgcggcaacggccaccaag
gcggcggcgccaaaggctgctcccaaggccaaggccgcaccgaagacgacagtcaaggcg
gagcccaaggtagcagcgaagccgaagaaggctgctgccgccagcaccgccaaggcgccg
agcaagtccaagaaggcgaagactccgaaagcggaggccgctgaataa
DBGET
integrated database retrieval system
