Rugositalea oryzae: RHPLAN_42410
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Entry
RHPLAN_42410 CDS
T04290
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
rhz
Rugositalea oryzae
Pathway
rhz02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rhz00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RHPLAN_42410
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rhz02000
]
RHPLAN_42410
Transporters [BR:
rhz02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
RHPLAN_42410
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
DUF5330
Motif
Other DBs
NCBI-ProteinID:
AMN42671
UniProt:
A0A127EZ69
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All DBs
Position
4900956..4902557
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AA seq
533 aa
AA seq
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MYLRRTTGSLLLLAALTITPASAGEIFRIAGKGDFKSLDPFSLNEILTLGLHGQISEGLT
KRDRDLKIVPGLAVSWETPEPTRWRFHLRRGVKFQSGDDFTADDVVFSADRVRAQGSDVK
NMLPADVKSVLKVDDYTVDFVLEHSNPILNASFDTWYMVSKKWAERVGAVAPVSAAQSGY
ASTHANGTGPFLVADHVPGLKTTFVPNPHWWGKPQHNFDRVEYVTIANDATRVAALQSGE
VDMIDPVPLQDIERLRGAGLKVLTGPETRSMFFGFDQSRDELLVSDIKGRNPFKDERVRR
AFALALNLQAIHDKVMRGNSVIASSIVSPLVFPDVKNIDRQPYDPEEAKRLLAQAGYPHG
FSFGLACTNDRYVRDADLCSVGASMLAKVGLRAQLDIQPKARFFAQVGAAGGYKVPGAFL
LGWVAVSNDALDPLFNLIMTRDGKGQGSYNLGGISNAKIDALGAQIRTETDNLKRHGLIM
QALQTVRDHTLVVPLHQQTLAWGTAADVTVEQRADGQIQFSTYSKHPTTVGAK
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atgtacctgcgcaggactaccggctccctcctcctgctcgccgccctgaccatcaccccg
gcttcggctggcgaaatcttccgcattgccggcaagggagatttcaagtcgcttgatccg
ttttccttgaacgaaatcctgacgctgggcctccatggccaaatcagcgaaggattgacc
aagcgggatcgtgacctgaagatcgtgcccggtctcgccgtatcttgggaaactccggag
ccgacccgctggcgttttcacctgcgccgcggcgtcaaattccaaagtggcgacgacttc
actgccgatgacgtcgtgttctccgcagatcgcgtccgcgcccagggcagcgacgtcaaa
aacatgctcccggccgatgtgaagagcgtgctcaaggttgacgattacacggtcgacttc
gtgcttgagcattccaacccgatcctcaacgcgagcttcgacacttggtacatggtctcg
aagaaatgggccgagcgcgtcggggctgtggctcctgtttccgcggcacagagtggctac
gcctccactcacgcgaacggcaccggtccgttcttggtcgctgaccacgtccccggcttg
aagacgaccttcgtccccaacccgcactggtggggcaagccgcagcacaatttcgaccgc
gtcgagtatgtgacgattgccaacgacgccactcgggttgccgcattgcagtccggcgaa
gttgacatgatcgaccccgtgccgctgcaggacatcgagcgccttcgcggcgccggcctc
aaagtgctgacgggcccggaaacccgctcgatgttcttcggcttcgatcaaagccgcgat
gagctgctggtgtcggacatcaagggccgcaacccgttcaaggacgagcgcgttcgccgt
gcctttgcgctggcattgaacctccaggccatccacgacaaggtgatgcgaggaaattct
gtaattgcctcgtcaatcgtttcgccactggtgtttccggacgtcaagaacattgaccgt
cagccatacgaccccgaggaggccaagcgtctgctggcacaagcgggttatccgcacgga
ttttcattcggtcttgcgtgcacaaatgatcggtacgttcgcgacgcggatctttgttca
gtcggcgcatccatgctggccaaggtcggcctgcgtgctcaactcgacatccagccgaag
gctcgtttcttcgcccaggtcggcgcggcgggtggctacaaagtccccggcgcttttctg
ctcggctgggtcgccgtctccaacgacgctctcgatccgctgttcaatttgattatgacc
agggacggcaagggccagggctcatataaccttggcggcatctcgaatgccaagatcgac
gcgctcggagcgcagatccgcaccgaaaccgacaacctcaagcgccacggcctgatcatg
caggccctccagaccgtgcgagaccacactctggtggtcccgctgcatcagcagaccctc
gcatggggcaccgctgcagacgtcaccgtcgaacaacgggccgacggccagatccaattc
tcgacctactccaagcatccgaccaccgttggagcaaaatga
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