Rhodoplanes sp. Z2-YC6860: RHPLAN_44210
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Entry
RHPLAN_44210 CDS
T04290
Name
(GenBank) ATP-dependent DNA ligase
KO
K10979
DNA end-binding protein Ku
Organism
rhz
Rhodoplanes sp. Z2-YC6860
Pathway
rhz03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
rhz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
RHPLAN_44210
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhz03400
]
RHPLAN_44210
DNA repair and recombination proteins [BR:
rhz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
RHPLAN_44210
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Motif
Pfam:
Ku
Motif
Other DBs
NCBI-ProteinID:
AMN42850
UniProt:
A0A127EZZ5
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Position
complement(5093565..5094533)
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AA seq
322 aa
AA seq
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MAARPYWKGNLRLSLVTCPIELHSATSEKDKISFNQLNKRTGNRIKYKKVDASTNEEVPT
EDIVKAFQFEKDSYVQFEPDELEEIALDTNHTIDIVSFVPDSEIDELYYNTPYYILPGEQ
DHAAEAFSVIREALNEKGMVGIGRVVFGSREHMIALRPRSKGMVGTTLLYPYEVKKEAPL
FAEIPNIKIDREMLGMAHQIMKGKQGHFEPEKFEDRYETALRELVAKKQKGAVIHTEAPA
KAATNVVNLMDALRKSLAEGGGAASAKKSASGKSKAKQDDLRRQPQFKFPIEGGKAKQGK
EAKESKVVAAPVSRAKAKRKSA
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atggccgcgcgtccgtattggaaaggcaatctgcgcctctctctcgtcacctgtccgatc
gaactgcattcggcgacgtcggagaaggacaagatcagcttcaatcagctcaacaagcgc
accggcaaccgtatcaaatacaagaaggtcgatgcctcgaccaacgaagaggtgcccacc
gaggacatcgtgaaggccttccagttcgagaaggactcgtacgtccagttcgagccggac
gagctcgaggagatcgcgctcgacaccaaccacacgatcgacatcgtgtcgttcgttccc
gacagcgagatcgacgagctctactacaacacgccgtactacatcctgccgggcgaacag
gaccatgccgccgaggcgttctcggtgatccgcgaagcgctgaacgagaagggcatggtc
gggatcggtcgcgtggtgttcggctcacgcgagcacatgattgcgctgcggccgcgcagc
aaaggcatggtcggcaccacgctgctctatccttacgaggtcaagaaggaagcgccgctg
tttgccgagattcccaatatcaagatcgaccgcgagatgctcggcatggcgcaccagatc
atgaaggggaagcagggccacttcgagccggagaaattcgaagaccgttacgagacagcg
ttgcgcgaactcgtcgccaagaagcagaaaggcgcggtgatccacaccgaggcgccagcg
aaggctgcgaccaacgtcgtcaatctgatggatgcgctgcggaaaagccttgccgagggc
ggcggcgccgcgagcgcgaagaagagcgcgtcaggcaagtcgaaagccaagcaggacgat
ctgcgccgccagccgcaattcaagtttccgatcgagggcggcaaggccaagcagggcaaa
gaggccaaagagagcaaagtggttgccgcgcccgtgtcgcgcgccaaggcaaagcggaag
tcggcctga
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