KEGG   Rhodoplanes sp. Z2-YC6860: RHPLAN_44210
Entry
RHPLAN_44210      CDS       T04290                                 
Name
(GenBank) ATP-dependent DNA ligase
  KO
K10979  DNA end-binding protein Ku
Organism
rhz  Rhodoplanes sp. Z2-YC6860
Pathway
rhz03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:rhz00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    RHPLAN_44210
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rhz03400]
    RHPLAN_44210
DNA repair and recombination proteins [BR:rhz03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     RHPLAN_44210
SSDB
Motif
Pfam: Ku
Other DBs
NCBI-ProteinID: AMN42850
UniProt: A0A127EZZ5
LinkDB
Position
complement(5093565..5094533)
AA seq 322 aa
MAARPYWKGNLRLSLVTCPIELHSATSEKDKISFNQLNKRTGNRIKYKKVDASTNEEVPT
EDIVKAFQFEKDSYVQFEPDELEEIALDTNHTIDIVSFVPDSEIDELYYNTPYYILPGEQ
DHAAEAFSVIREALNEKGMVGIGRVVFGSREHMIALRPRSKGMVGTTLLYPYEVKKEAPL
FAEIPNIKIDREMLGMAHQIMKGKQGHFEPEKFEDRYETALRELVAKKQKGAVIHTEAPA
KAATNVVNLMDALRKSLAEGGGAASAKKSASGKSKAKQDDLRRQPQFKFPIEGGKAKQGK
EAKESKVVAAPVSRAKAKRKSA
NT seq 969 nt   +upstreamnt  +downstreamnt
atggccgcgcgtccgtattggaaaggcaatctgcgcctctctctcgtcacctgtccgatc
gaactgcattcggcgacgtcggagaaggacaagatcagcttcaatcagctcaacaagcgc
accggcaaccgtatcaaatacaagaaggtcgatgcctcgaccaacgaagaggtgcccacc
gaggacatcgtgaaggccttccagttcgagaaggactcgtacgtccagttcgagccggac
gagctcgaggagatcgcgctcgacaccaaccacacgatcgacatcgtgtcgttcgttccc
gacagcgagatcgacgagctctactacaacacgccgtactacatcctgccgggcgaacag
gaccatgccgccgaggcgttctcggtgatccgcgaagcgctgaacgagaagggcatggtc
gggatcggtcgcgtggtgttcggctcacgcgagcacatgattgcgctgcggccgcgcagc
aaaggcatggtcggcaccacgctgctctatccttacgaggtcaagaaggaagcgccgctg
tttgccgagattcccaatatcaagatcgaccgcgagatgctcggcatggcgcaccagatc
atgaaggggaagcagggccacttcgagccggagaaattcgaagaccgttacgagacagcg
ttgcgcgaactcgtcgccaagaagcagaaaggcgcggtgatccacaccgaggcgccagcg
aaggctgcgaccaacgtcgtcaatctgatggatgcgctgcggaaaagccttgccgagggc
ggcggcgccgcgagcgcgaagaagagcgcgtcaggcaagtcgaaagccaagcaggacgat
ctgcgccgccagccgcaattcaagtttccgatcgagggcggcaaggccaagcagggcaaa
gaggccaaagagagcaaagtggttgccgcgcccgtgtcgcgcgccaaggcaaagcggaag
tcggcctga

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