Rugositalea oryzae: RHPLAN_50490
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Entry
RHPLAN_50490 CDS
T04290
Name
(GenBank) O-antigen polymerase
KO
K02847
O-antigen ligase [EC:
2.4.99.26
]
Organism
rhz
Rugositalea oryzae
Pathway
rhz00540
Lipopolysaccharide biosynthesis
rhz01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rhz00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
RHPLAN_50490
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
rhz01005
]
RHPLAN_50490
Enzymes [BR:
rhz01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.26 O-antigen ligase
RHPLAN_50490
Lipopolysaccharide biosynthesis proteins [BR:
rhz01005
]
Core region
RHPLAN_50490
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Wzy_C
Motif
Other DBs
NCBI-ProteinID:
AMN43473
LinkDB
All DBs
Position
complement(5792274..5793590)
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AA seq
438 aa
AA seq
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MVEQPVRESWIATYGASVVGPKFFQARCFEIERWQRAADGFACGIAIALPWSTTATWIFI
GLWLFALIPILDGPGLRRVLAMPAGGLPVLLWLLALIGMLWATGVPMAERWGGLSSVFKF
LAIPLLMFQFQRSSRASWVMIGFLASCGVLLILSWAIVLVPSLPMHWTRRDGFGVPVRDY
IAQTGEFAACIFLLAGIALQAYRQQRRSLALVLSLAALLFLANLFVISTSRTGLVVIPLL
LLLFLWRHVDRRRLLGALIATAVLGIAACLLSSNVRTSVTSLFDEVRGFNPNATIPTRAG
ERLEFWRKSIDFVVAAPILGHGTGSIPDQFRRAAVGQTGMASAASTNPHNQIFGVAIQLG
LIGTAVVLAMWLAHLMLFRGGGLVAWAGLMVVAENVLSSLFNSHLFDFTQGWGYVLGVGV
AAGAVLRQLSHSRAEKAP
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atggttgagcagcccgtccgggaatcgtggatcgcgacatatggcgcgagcgttgtcggc
ccgaaattctttcaagccaggtgtttcgagatcgagcgctggcaacgcgcggcggacggg
ttcgcttgcgggatcgcgatcgcattgccgtggtcgacaaccgcgacctggattttcatc
gggctctggctgtttgcactgattccaattctcgatggaccgggactgcggcgcgtcctg
gccatgccggccggcggacttccggttctgctctggctgctggcgctcattggaatgttg
tgggccaccggcgtgccaatggcggagcgttggggcgggctttcatcggtgttcaagttc
ctggcgattccgctgttgatgttccagtttcagcgatcaagccgcgcctcatgggtgatg
atcgggtttctggcatcctgcggcgttctgctcatcctgtcctgggcgatcgtgctcgtg
ccgagcttgccgatgcactggacgcggcgcgatggctttggtgttccagtgagagattac
atcgcgcaaaccggagagttcgcggcttgcatcttccttcttgccggcatcgcgttgcag
gcctaccggcagcagcggcgctcgcttgcgcttgtgctttcgctcgcggcgttgttgttt
ctcgccaacctgttcgtgatctcgacaagccgtaccggcctcgtcgtcattccgttgctg
ctgctgctttttctgtggcgccatgtcgatcggcggcgactgctgggcgcattgatcgcc
acggccgtgctcggaatagctgcatgcctgctgtcgtccaatgttcgcaccagcgtcaca
agtctgtttgacgaagtccgcgggttcaacccgaatgccaccatacccacgcgcgcagga
gagcggctggagttctggcggaaatccatcgacttcgtcgtcgccgcgccgatcctgggc
cacggcactggctcgattccggatcagtttcgccgcgcagccgttggacaaaccggcatg
gcgagtgccgcatcgaccaatccgcataatcagatcttcggtgtggccattcagctgggg
ctgattggaactgccgtggtgctggccatgtggcttgctcatctcatgctgttccgtggc
ggaggcctggtcgcctgggcggggctgatggtggtggcggagaacgtcttgagctcgctg
ttcaactcgcacctgttcgatttcactcaagggtggggctacgtcttgggggtcggcgtc
gccgctggcgcagtcttgcgacagctttcacacagccgggccgaaaaagccccataa
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