Rhodoplanes sp. Z2-YC6860: RHPLAN_52060
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Entry
RHPLAN_52060 CDS
T04290
Name
(GenBank) 3-hydroxyacyl-CoA dehydrogenase
KO
K01782
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
]
Organism
rhz
Rhodoplanes sp. Z2-YC6860
Pathway
rhz00071
Fatty acid degradation
rhz00280
Valine, leucine and isoleucine degradation
rhz00310
Lysine degradation
rhz00362
Benzoate degradation
rhz00380
Tryptophan metabolism
rhz00410
beta-Alanine metabolism
rhz00640
Propanoate metabolism
rhz00650
Butanoate metabolism
rhz00907
Pinene, camphor and geraniol degradation
rhz00930
Caprolactam degradation
rhz01100
Metabolic pathways
rhz01110
Biosynthesis of secondary metabolites
rhz01120
Microbial metabolism in diverse environments
rhz01200
Carbon metabolism
rhz01212
Fatty acid metabolism
Brite
KEGG Orthology (KO) [BR:
rhz00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
RHPLAN_52060
00650 Butanoate metabolism
RHPLAN_52060
09103 Lipid metabolism
00071 Fatty acid degradation
RHPLAN_52060
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
RHPLAN_52060
00310 Lysine degradation
RHPLAN_52060
00380 Tryptophan metabolism
RHPLAN_52060
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
RHPLAN_52060
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
RHPLAN_52060
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
RHPLAN_52060
00930 Caprolactam degradation
RHPLAN_52060
Enzymes [BR:
rhz01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
RHPLAN_52060
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
RHPLAN_52060
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
RHPLAN_52060
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Pyr_redox_2
ApbA
Motif
Other DBs
NCBI-ProteinID:
AMN43629
UniProt:
A0A127F298
LinkDB
All DBs
Position
complement(5970552..5972669)
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AA seq
705 aa
AA seq
DB search
MSKSPAPKPVLDILEPRDLELGPFAAGETRDDGFSWKHWRMRSDEDGVVWLLFDKQGASA
NTLDDETLTELDAALDRLEHDRPPGLVIRSSKPGGFVAGADIAQFRRITDAAQIEALLTR
GHAVLDRLDRLPLPTVAVIHGYCLGGGLELALACDKRIAVDDASFGFPEVLLGLHPGLGG
TVRLPRLINPVQAMTMMLTGKTERGRRAKSLGLVDALTQERHVRAAVKDAIGGGLKPHRQ
GLLDRLHDVGPARSLLASRMRTEAAKKAPKKDYPAPYQLIDLWVAHGGDRDMMQKEEIKS
FSRLLVSETSRNLVRVFFLREKLKGLAKGRWEGRRVHVIGAGAMGGDIAAWCAWHGFTVS
LADMKPEPLAGAIKRAAELYGKIGRDNRRKVRDALDRLIPDLQGEGAASADLIIEAVPEN
LGLKQKVFAGIEPKMKPGAILATNTSSIPLEQLRDGLKRPERLVGIHFFNPVSRMQLVEV
VSHDQVATDVLAGAGAFLGRIDRLPAPVKSSPGFLVNRALTPYMLEAMVMLDEGMKKESI
DRAAEDFGMPMGPIELADQVGLDICLHVAEMLKSSNPDLPDPPQWLRDKVAKGELGKKTG
KGLYDWKHDRATKAGEAAAPTPETIDRLILPMLNVCMACLREGVVTDEEIVDGAMVFATG
FAPFRGGPMNYARTRGAGDVRDTLARLAVKYGPRFRPDAGWDSLE
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaatcacccgctccaaaacccgtcctggacattctcgaaccacgcgatctggag
cttggaccgttcgcagccggtgagacgcgcgatgacggcttttcgtggaagcattggcgg
atgcggtccgacgaggacggcgtcgtttggctgctgttcgacaaacaaggcgcgagcgcg
aatacgctggatgacgagaccctcaccgagcttgacgctgcgctcgacagactggagcat
gaccgtccgccgggtctggtcattcgctcgagcaagcccggcggcttcgtcgcaggcgcc
gacatcgcgcagtttcgccgcatcaccgatgcggcgcagatcgaagcgctgctgacgcgc
ggccacgctgttctcgatcggctcgaccgcctgccgctgccgaccgttgccgtgatccac
ggctattgcctcggcggtggtcttgaactggcgctggcctgcgacaaacggatcgccgtt
gacgacgcgagctttggatttcccgaggttctgctcggactgcatcccggtcttggcggg
acggtgaggcttccgcgcctgatcaatccagtccaggccatgacgatgatgttgacggga
aagaccgagcgcgggcgccgggccaagtcgctcggcttggtcgacgcgctgacgcaggag
cggcatgtccgggccgccgtgaaggatgccatcggcggcgggttgaagccgcatcggcaa
ggcttgctcgacaggttgcacgacgtcggcccggcgcgaagcctgctggcctcccgcatg
cggaccgaagccgccaagaaagcgcccaagaaagattatccagccccgtatcagttgatc
gatctttgggtcgctcatggcggcgatcgcgacatgatgcagaaggaggagatcaaatcc
ttctcccgattgctggtttcggaaacatcaagaaatcttgtccgcgtgttctttctgcgc
gagaagctcaagggccttgcgaaaggccgttgggagggccgccgcgttcatgtcatcggc
gccggcgccatgggaggtgacatcgcggcgtggtgcgcgtggcatggtttcaccgtcagt
cttgccgacatgaagcccgagcctctcgccggcgcgatcaagcgcgccgccgagctctat
ggaaaaatcggccgcgacaaccgccgcaaggtccgcgatgcgctcgaccgattgattccc
gatcttcagggcgaaggggccgcgtctgccgacctgatcatcgaggctgtgccggaaaat
cttggcctgaagcaaaaggtctttgccggtattgaaccgaaaatgaaacccggtgcgatc
cttgccacaaacacgtcgagcattccgctcgaacagttgcgtgatggtctgaagcgacct
gagcggctggtcggtatccactttttcaatccggtttcgcggatgcagcttgtcgaagtc
gtcagccacgaccaggtcgcgacagatgtcctggccggcgccggcgcgttcctcggccgg
atcgatcggctccccgcaccggtcaagagctcacccgggttcctggtgaaccgcgcgctg
acaccgtacatgctggaagccatggtgatgctcgacgaaggcatgaagaaagagagcatc
gacagggcggccgaggatttcggcatgccgatgggcccgatcgagcttgccgaccaggtc
ggtctcgacatctgcctgcatgtcgccgagatgctcaagagcagcaatccggatctgccc
gatccgccgcaatggctcagggacaaagtcgcaaagggcgagttgggaaagaagaccggg
aaggggctgtacgattggaagcatgatcgtgccaccaaggcgggcgaggcggctgcaccg
acgccagagacgatcgatcgcttgatcctgcccatgctcaacgtctgcatggcctgtttg
cgggagggcgtggtgacggacgaggagatcgtcgacggcgcgatggtcttcgcgacaggt
ttcgccccgttccgtggcgggcccatgaattacgcgcggacgcggggagccggtgacgtg
cgtgataccttggcacgtctcgcagtgaaatatggtccgcgtttccggccggacgcgggc
tgggacagcctggaatga
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