Rhodoplanes sp. Z2-YC6860: RHPLAN_56480
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Entry
RHPLAN_56480 CDS
T04290
Name
(GenBank) transcriptional regulator, LysR family
KO
K21900
LysR family transcriptional regulator, transcriptional activator of the cysJI operon
Organism
rhz
Rhodoplanes sp. Z2-YC6860
Brite
KEGG Orthology (KO) [BR:
rhz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rhz03000
]
RHPLAN_56480
Transcription factors [BR:
rhz03000
]
Prokaryotic type
Helix-turn-helix
LysR family
RHPLAN_56480
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_5
HTH_28
PBP_like
HTH_20
MarR_2
HTH_30
HTH_23
Motif
Other DBs
NCBI-ProteinID:
AMN44064
UniProt:
A0A127F0S4
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All DBs
Position
6500858..6501775
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AA seq
305 aa
AA seq
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MQLEARLRAFSAFARRRSFSAAASELRISQPAVSKHIADLEQLLGLKLVERARRDGSLTS
AGEFVANYVLRAESLLAQSVRGVDELRKSGSGSLVIVASWLTGTYLLPEIIAEFKYIHPG
VLVSLELGTAKQAVERLRSHRAELGFIAGAVTGPEIEAEPLLENDIVIVGKPALRPPRIS
RDSLESLAWISREEGSATRSSSEVAMARLGIAPRQRLELPSYEAVVSALKRGYGISAIRR
YVVADQLKSGTLVVFPVRGWKVKTVVSALRVRDVVLTPSAEQFQSLVRVRFAEIARLRKQ
AATSS
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgcagctcgaagcgcggttgcgggctttttcggcgttcgcccggcgccggtccttctcg
gcggcggcaagcgagcttcgcattagccagcccgcggtctccaaacatatcgccgatctt
gagcagcttctgggattgaagctcgtggagcgtgcgcggcgagatgggtcgctgacgagc
gctggcgagttcgttgcgaactacgttttgcgtgccgagtccttgctcgcgcaatcggtc
cgcggggtggacgagcttcgcaagagcggttcggggtctttggtcattgtcgcgtcgtgg
ttgaccgggacatacctgcttcccgagatcatcgcagagttcaaatacattcatccgggt
gttctcgtttcgctcgagctcggaacggcaaaacaggcggtcgaacggctccgatcgcat
cgcgccgaattgggattcatcgccggcgcggtcaccggtcccgagatcgaggcggagccg
ctcttggaaaacgacattgtgatcgtgggcaagcccgctcttcgtccgccacggatttcg
cgcgacagtctcgaatccttggcgtggatttctcgcgaggaaggctcggcgacgcggagc
tcttcggaagtggcgatggcgcgtttggggattgcgccccggcagcgtttggagcttccc
tcctatgaagctgtcgtgtcggccttgaagagaggctacggcatttcggccatccgccgc
tacgtcgtggccgatcaactgaagtccggaactctggtggttttcccggttcgcggctgg
aaggttaagacagtcgtctcagcgcttcgcgtgcgcgacgtcgttctcacgccttccgct
gaacagttccaaagcctcgtgcgcgtgagatttgccgaaattgctcgattgcggaagcag
gctgcgaccagctcctaa
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