Rugositalea oryzae: RHPLAN_56670
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Entry
RHPLAN_56670 CDS
T04290
Name
(GenBank) molecular chaperone GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
rhz
Rugositalea oryzae
Pathway
rhz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rhz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RHPLAN_56670
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rhz03019
]
RHPLAN_56670
03110 Chaperones and folding catalysts [BR:
rhz03110
]
RHPLAN_56670
03029 Mitochondrial biogenesis [BR:
rhz03029
]
RHPLAN_56670
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rhz04147
]
RHPLAN_56670
Enzymes [BR:
rhz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
RHPLAN_56670
Messenger RNA biogenesis [BR:
rhz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
RHPLAN_56670
Chaperones and folding catalysts [BR:
rhz03110
]
Heat shock proteins
HSP60 / Chaperonin
RHPLAN_56670
Mitochondrial biogenesis [BR:
rhz03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
RHPLAN_56670
Exosome [BR:
rhz04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
RHPLAN_56670
Exosomal proteins of other body fluids (saliva and urine)
RHPLAN_56670
Exosomal proteins of breast cancer cells
RHPLAN_56670
Exosomal proteins of colorectal cancer cells
RHPLAN_56670
Exosomal proteins of bladder cancer cells
RHPLAN_56670
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
KH_PARP14_2
Motif
Other DBs
NCBI-ProteinID:
AMN44083
LinkDB
All DBs
Position
complement(6524488..6526113)
Genome browser
AA seq
541 aa
AA seq
DB search
MAAKEVRFSTEAREKMLRGVDTLANAVKVTLGPKGRNVVIEKSFGAPRITKDGVTVAKEI
ELEDKFENMGAQMVREVASKTNDLAGDGTTTATVLAQAIVKEGSKAVAAGMNPMDLKRGI
DLAVQAVVSDLKSHAKKVTSNSEIAQVGTISANGDTEIGRFLAEAMQKVGNDGVITVEEA
KSLNTELEVVEGMQFDRGYVSPYFVTNAEKMKVELEDPYVLIHEKKLSGLQTMLPLLEAV
VQTGKPLLIVAEDVEGEALATLVVNRLRGGLKVAAVKAPGFGDRRKAMLEDIAVLTGGTA
ISEDLGIKLEKVTLQMLGRAKKVVIEKESTTIVEGAGKKKDIEARVTQIKSQIEETTSDY
DREKLQERLAKLAGGVAVIRVGGATEVEVKERKDRVDDALHATRAAVEEGILPGGGVALL
RALKSLQAINPSNPDQKAGVDIVRRAIQVPARQIVQNAGEDGSVVVGKLLENDKYAWGFN
AATGEYQDLVGAGVIDPAKVVRTALQDAASVAGLLITTEALVADKPKKETPVHAAPGGMD
Y
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atggctgccaaggaagtgagattttcgacggaggcgcgcgagaagatgctgcgcggcgtg
gacaccctcgcaaacgcggtgaaggtgacgctcggtccaaagggccgcaacgtcgtaatc
gagaaatcgttcggcgcgccgcgcatcacgaaggatggcgtcacggtcgccaaggagatc
gagctcgaagacaagttcgagaacatgggcgcccagatggtgcgtgaggtcgcgagcaag
accaatgacctcgccggcgacggcaccaccaccgcgacggttctcgcgcaggcgatcgtc
aaggagggttcaaaggccgttgcggccggaatgaaccctatggacctgaaacggggcatc
gacctcgcggtccaagcggtggtttcggatctgaagagccacgccaaaaaggtgacgtcc
aactccgaaatcgcccaggtcggcacaatctctgcgaacggcgataccgagatcgggcgc
ttcctcgctgaggcgatgcagaaggtcggcaacgacggggtcatcactgtcgaggaagcc
aaaagtctcaacaccgagctcgaagtcgtcgaaggcatgcagttcgaccgcggctatgtc
tcgccgtacttcgtcaccaacgcagaaaagatgaaggtcgagctcgaagatccctacgtt
ctgatccacgagaagaagctcagcggtctgcagaccatgctgcctctgcttgaggcggtg
gtgcagaccggcaagcctctgttgatcgtggcggaggatgtggagggtgaagcgctcgcc
acactagtcgtgaacaggctgcgaggcggactgaaggttgcggccgtaaaggcgccgggc
ttcggcgaccgccgcaaggcgatgctggaggacatcgcggtcctgacggggggcaccgcg
atctctgaagacctcggcatcaaactggagaaggtgaccctgcaaatgctcggtcgcgct
aagaaggtcgtgatcgagaaggagagcaccacgatcgtcgagggcgcaggcaagaagaag
gacatcgaagcccgcgtcacccagatcaagtcccagatcgaggagaccacctcggactat
gaccgtgaaaagctgcaagagcgtttggcaaagctcgcgggcggcgtcgcggtgatccgc
gtcggcggtgcaaccgaggtcgaggtcaaggagcgcaaggatcgtgtcgacgatgcgctc
cacgccacccgcgcggccgtcgaagagggcatccttcccggcggcggcgtggcactgctg
cgtgccctcaagagcctgcaggcgatcaacccgtccaatccggatcagaaggcgggggtg
gacatcgtgcgccgggcaatacaggtgccggcccggcagatcgtgcaaaacgcgggcgag
gacggctccgtggtcgtcggcaagctcctggagaacgataagtacgcctggggcttcaac
gcggcgactggcgagtaccaggacctcgtaggcgccggcgtgatcgacccagccaaagtt
gtgcggactgcgctgcaggacgcagcctcagtggccggcctgttgatcacgacagaagcc
ctggtggcggacaagccgaagaaggaaacacccgttcacgctgccccggggggaatggac
tattga
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