Rhodoplanes sp. Z2-YC6860: RHPLAN_58640
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Entry
RHPLAN_58640 CDS
T04290
Name
(GenBank) type I secretion system ABC transporter, HlyB family
KO
K11004
ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
Organism
rhz
Rhodoplanes sp. Z2-YC6860
Pathway
rhz02010
ABC transporters
rhz03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
rhz00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
RHPLAN_58640
03070 Bacterial secretion system
RHPLAN_58640
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rhz02000
]
RHPLAN_58640
02044 Secretion system [BR:
rhz02044
]
RHPLAN_58640
Transporters [BR:
rhz02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
RHPLAN_58640
Secretion system [BR:
rhz02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
RHPLAN_58640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
Peptidase_C39
SMC_N
AAA_29
AAA_24
AAA_16
AAA_18
AAA_22
AAA_33
P-loop_TraG
DUF87
Motif
Other DBs
NCBI-ProteinID:
AMN44276
UniProt:
A0A127F1D2
LinkDB
All DBs
Position
complement(6762841..6764982)
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AA seq
713 aa
AA seq
DB search
MSTRTDSARPADPGLEALVTLLHLQGVAADAEQIRHRLGTDKIGAPEMLRCAKDLGLKAR
AYRTDWSRLARTPLPAVAVLHDGGFLVVAKAADDKVLVQSPHALRPALMTQAEFVAVWDG
RLILMTRRAGLSDITRRFDITWFLGAIHKYRHLLAEVLVASFFLQLLGLVSPLFFQVVID
KVLVHRALSTLDVLVIGLVTISIFETVLGTMRTYLFSHTTNRIDVELGARLFHHLLALPM
AYFQARRVGDSVARVRELENIRNFLTSSALTLAIDLFFTFVFLAVMFYYAPPLTWIVLAS
FPFYVAISAGVTPLFRRRLNEKFQRGAENQAFLVESVTGIETLKAMAVEPQMQRRWEEQL
AGYVAASFRVLSLGNTASQVVQLVSKIVTASILYFGARLVIDGSLSVGELVAFNILAGRV
SAPVLRLAQVWQDFHQARLSISRLGDILNTTAEPIYATGRARLPAIRGHIKFDHVTFRYR
VDGQEVLHDVSFDVPAGQTVGIVGPSGSGKSTFAKLVQRLYIPESGRVLVDGMDLAMADP
AWLRRQIGVVLQENVLFNRSVRENIALADPAMPMERIIAAAKLAGAHDFILELSEGYDTV
VGERGSTLSGGQRQRIAIARALVTDPRILIFDEATSALDYESERIIQQNMKEIAKGRTVL
VIAHRLSTVRATDRIVTLERGRLVEDGTHDALIKTGGRYASLHRLQGGIHEVG
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
gtgagcacaagaaccgacagcgcgagaccggccgatcctggtctcgaggccctcgtgacg
ctgttgcatctccagggcgttgcggccgatgccgaacagatcaggcatcggctaggaacc
gacaaaattggcgcaccggaaatgctccggtgcgccaaagacctcgggctcaaagcccgg
gcctatcgaaccgactggtcccgactcgcccgcactcccttgcctgccgtagctgtgctg
cacgacggcggattcctggtggtcgccaaggccgcggacgataaggtcctggtccaatcg
ccgcacgcgctccggcccgcgctgatgacgcaggctgagttcgtcgcggtttgggacggc
cggctgatcctgatgacccgacgggccggactgtcggacatcacgcgccggttcgacatc
acctggtttctgggagccatccacaaataccggcatctcctggccgaggttcttgtcgcg
tcgttcttcttgcaactgctcggcttggtctcgccgctgttctttcaggtcgtcatcgac
aaggtgctggtgcaccgggcgctgagcaccctcgacgtgctggtcatcggtctggtgacg
atctcgattttcgagaccgtcctcggcacaatgcggacctatctgttctcgcacacgacc
aaccgcatcgacgtcgagctcggcgcgcgcctgttccaccacctcctcgcattgccgatg
gcctatttccaggcccggcgggtcggcgattcagttgcacgcgtgcgcgagctggagaat
atccgtaatttcctcaccagctcggccctgacgcttgcgatcgacttgttcttcaccttc
gtgttcctggcggtgatgttctattacgcgccgccgctgacctggatcgtcctcgcctcg
ttcccgttctatgtcgcgatctcggcgggggtgacgccgctgttccggcggaggctgaat
gaaaaattccagcgtggtgccgagaaccaggccttcctggtcgagagcgtgaccgggatc
gagacgctcaaggccatggcggtcgagcctcaaatgcagcgccgctgggaagaacagctc
gcaggctatgtggctgcgagcttccgggtgctgagcctcggcaacaccgcgagccaggtg
gtgcagctcgtcagcaagatcgtcaccgcttcgatcctctatttcggcgccaggctggtg
atcgatggcagcctgtcggtcggcgaactcgtggccttcaacatcctcgccggccgcgtg
agcgcgcccgtgctgcgcctcgcgcaggtttggcaggattttcaccaggcgcggctgtcg
atctcgcggttgggagatatcctcaacaccacggcggagccgatctatgcgaccgggcgg
gcgcgcctgcccgcgatccgcggccacatcaagttcgaccatgtgacgttccgctatcgt
gtcgacgggcaggaggtcctgcacgacgtcagcttcgatgttccggccggccagaccgtc
ggcatcgtcgggccttcggggtcgggcaagagcactttcgccaagctcgtccagcgcctc
tacatcccggagagcgggcgcgtcctggtggacggcatggatctcgccatggccgacccg
gcctggctgcgccgccagatcggagtcgttctgcaggagaacgtgctgttcaaccgttct
gtgcgcgagaacatcgcgctcgccgatccggcgatgccgatggagcggatcatcgcggcg
gcaaagctcgcgggagcccacgacttcatccttgagctgagcgaaggctacgacaccgtt
gtcggcgaacgcggctccactttgtcgggcggccagcgccagcgcatcgccattgcgcgc
gcgctcgtgaccgacccgcgcatcttgatcttcgatgaggcgaccagcgccctcgactac
gagagcgagcgcatcattcagcaaaacatgaaggagatcgccaagggcaggaccgttctg
gtcatcgcgcacagactttcgaccgtgcgggcgacggatcgcatcgtcacgctggagcgc
ggccgcctggtcgaggacggcacccacgatgcgctcatcaagactggcggccgctacgcc
tcgttgcatcgactgcagggagggatccatgaagtcggctga
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