Rhodoplanes sp. Z2-YC6860: RHPLAN_62420
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Entry
RHPLAN_62420 CDS
T04290
Name
(GenBank) peptidoglycan binding domain-containing protein
KO
K21470
L,D-transpeptidase YcbB
Organism
rhz
Rhodoplanes sp. Z2-YC6860
Brite
KEGG Orthology (KO) [BR:
rhz00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rhz01002
]
RHPLAN_62420
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rhz01011
]
RHPLAN_62420
Peptidases and inhibitors [BR:
rhz01002
]
Cysteine peptidases
Family C82
RHPLAN_62420
Peptidoglycan biosynthesis and degradation proteins [BR:
rhz01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
RHPLAN_62420
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Scaffold
YkuD
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
AMN44653
UniProt:
A0A127F2G2
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All DBs
Position
7190866..7192812
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AA seq
648 aa
AA seq
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MRHPRFDHLLAGTALAAALALTSTGGALAQSAQGKTQTAAAPAAATTDAIAVKDTPSADK
SANTGDLTNSAPSAAPAKATSTDKTPSAGSAIADRLKEQIASGKFDRFIGGKKERASIEQ
FYASRDFAPLWVADGALNSRAKAAADYLAGIEANGMDPADYVMPQIKSGDADALVDAEIK
FTDTVLTYARRAQTGQVNFTRVSGDISYDLVKPEPAEVLAKLAQASDVAEALDSYNPPQP
QFKALKAKLAEARKGSDVEKPMIPSGPTLKYSKDKKGQEVLMSDARVPALRERFGINSAN
GDTNYDRELSGAIAKFQKEHGLSPTGQLTSATLDAINGPKREKTVDIIIANMERWRWVPR
DLGKTYVMVNIPDYTLRVLRDGQQVWKTKVVVGKPNLPTPLISAEMKYITVNPTWNVPPS
IIQNEYLPALQQDPQAMERIGLKVEQHPDGTVRIYQPPGERNALGRIRFNFPNKFLVYQH
DTPDKNLFAHDKRAYSHGCMRVENPLKYGEVLLSLVLPNEHYTADRLQKMFGGSEINIQF
PHYVPVHLTYQTAFVDDEGKLQIRDDIYGRDQKLLSILKGSERKVADIAIDRPKGSTTAP
VKMQPGTFGGSGGGLFGGGPSFFDRLFGAAEPAPKPRARVNNDRRAQR
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atgcgacatccgcggtttgatcacctgctggcaggtacggcgctggctgccgccttagcg
ctgacctcgaccggcggggccttggcccaatcggcccagggcaagacgcagaccgcggcg
gccccggcggccgccacaacggacgcgatcgccgtcaaggacaccccgagcgccgacaag
agcgccaacaccggcgatctgaccaattcggcgccgagcgcagcccctgccaaggccact
tcgaccgacaaaaccccttcggccggcagcgcgatcgccgacaggctcaaggagcagatc
gcctccggcaagttcgaccgcttcatcggcggcaagaaggaacgcgcttcaatcgagcag
ttctatgcgagccgcgacttcgccccgctctgggtcgccgatggcgcgctgaacagccgc
gcgaaggcggccgccgattatctcgccggcatcgaagccaacggcatggatccggccgat
tatgtgatgccgcagatcaagtccggcgacgcggatgcgctcgtcgatgccgaaatcaaa
ttcaccgacacggtgctgacttatgcccggcgcgcccagaccggccaggtgaacttcacc
cgcgtttcgggcgacatctcctacgatctcgtgaagcccgaaccggccgaggtgctggcg
aagctggcacaggcttcggacgtcgccgaagccctcgacagctacaacccgccgcagccg
cagttcaaggcgctgaaagcgaagctcgccgaggcgcgcaagggctcggatgtcgagaag
ccaatgatcccgtcagggccgacgctgaaatatagcaaggacaagaagggccaggaagtt
ctgatgtccgacgcgcgggtgcccgcattgcgcgagcgcttcggcatcaattcggccaat
ggcgacaccaactacgaccgggaactgtccggtgcgattgccaagttccagaaggagcat
ggcctgtccccgaccggccagcttacgtcggcgacgctcgacgccatcaacggcccgaag
cgcgagaagactgtcgacatcatcatcgccaacatggagcgctggcgctgggtgccgcgc
gacctcggcaagacctacgtgatggtcaacattccggactacacgctgcgcgtcctgcgc
gacggccagcaggtgtggaagacaaaggtggtagtcggcaagccgaacctgccgacgccg
ctgatctccgccgaaatgaagtacatcacggtcaacccgacctggaacgtgccgccctcg
atcatccagaacgagtacctgccggcgcttcagcaggacccccaggcgatggagcgcatc
ggcctcaaggttgagcagcacccggacggcaccgtgcgcatctatcagccgccgggcgag
cgcaacgcgctcggccgcatccgcttcaacttcccgaacaagttcctggtctaccagcac
gatacgccggacaagaacctgttcgctcatgacaagcgcgcctacagccacggctgcatg
cgcgtcgagaacccgctgaagtacggcgaggtgctgctgtcgctggtgctgccgaacgaa
cactacacggcggatcggcttcagaagatgttcggcggctcggagatcaacatccaattc
ccgcactacgtgccggtgcatctcacctatcagacagccttcgtggacgacgagggcaag
ctgcagatccgcgacgacatctatggccgcgatcagaagctgctctcgatcctcaagggc
tccgagcgcaaggtggccgacatcgcgatcgaccggccgaagggctcgaccacggcgccg
gtcaagatgcagcccggcaccttcggcggctccggcggcggcctgttcggcggcggcccg
tcgttcttcgaccggctgttcggcgcggcagagcccgcaccgaagcccagggcgcgggtc
aacaacgaccgccgcgcccagcgctaa
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