Rugositalea oryzae: RHPLAN_67920
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Entry
RHPLAN_67920 CDS
T04290
Name
(GenBank) mechanosensitive ion channel MscS
Organism
rhz
Rugositalea oryzae
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Ortholog
Paralog
GFIT
Motif
Pfam:
MS_channel_2nd
MS_channel_3rd
MS_channel_1st
Motif
Other DBs
NCBI-ProteinID:
AMN45198
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Position
7830188..7831483
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AA seq
431 aa
AA seq
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MNPDDLENATTAIITTIRTTLRTELTSVWLPLQLGDIALTALVAIAIAALVRRRFDLSAA
TMGWPAYLRLAIRALIDNFAVLIFILLIIVTRASLEASLSHARTYLLLVATNLATAWVVI
AIVTSLIRNHFINRIVAVAAWTIAALSILGLLDATSAALDARGLMVGGIRVTPLLIIKTT
ALLLVAIWAASTTSNFLERRVQASSDLTPSVQVLLSKLIRIAMMAIAVVVVLSASGIDLS
VLAVLTGAIGVGVGLGLQKMVSNFVSGIMLLADKSIKPGDVISIGDHFGWVTNMGTRYTS
VDLKDGRELLVPNEDLVTQRVINWSYTSDRMQLQIKFSTSYDTPIGKTQAAAVEAALSVA
QVLKEPAPSCHITAFGATALEYVLWAWISSASEGPTRVRSAMMIAMWDTFERQGVVIPKP
GPSHIVLDKAP
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgaatccggacgatctcgaaaacgccacgacggcgatcatcacgaccattcgcacgacg
ctgcgcactgagctgacgtcggtctggctgccgcttcagcttggcgacatcgcgttgacg
gcgctggtggcgatcgcgatcgctgcgctggtgcgccggcgcttcgacctttccgcagcg
accatgggctggccggcctatctgcggcttgccatccgcgcgctcatcgacaacttcgcg
gtgctgatcttcatcctgctgatcatcgtcacgcgcgcgagcctcgaagcgtcgctcagc
catgcgcgcacgtatctgctgctggttgcgaccaatctcgccaccgcctgggtcgtgatc
gcaatcgtcaccagcctgatccgcaatcacttcatcaaccgcatcgtcgcggtcgcggcc
tggaccatcgcggcgctcagcattctcggactgctcgatgcgacctcggcggcgctcgat
gcccgcgggctgatggtcggcggcatccgggtgacgccgctcttgatcatcaagaccacg
gcgctgctgctggtcgcgatctgggccgcgagcacgacgagcaatttcctggaacggcgg
gtgcaagcgtcgtccgacctgacgccgtcggtgcaggtgctgctcagcaagctgatccgc
atcgccatgatggcgatcgccgttgttgtggtgctgagcgcgtccggcatcgacctgtcg
gtgctggcggtgctcacgggtgcgatcggcgtcggcgtgggcctcggcctgcagaagatg
gtctcgaacttcgtcagcgggatcatgctgctcgccgacaagtcgatcaaaccgggcgac
gtgatttcgatcggcgaccatttcggctgggtcaccaacatgggcacccgctacacctcg
gtcgatctcaaggacgggcgcgagctcctggtgccgaacgaggacctggtgacgcagcgg
gtgatcaactggtcctacaccagcgaccgcatgcagctgcagatcaaattctcgacgagc
tacgacacgccgatcggcaagacccaagccgcggccgtcgaggcggcgctcagcgttgcg
caagtgctgaaggaacccgcgccgtcgtgccacatcaccgcgttcggcgcgaccgcgctg
gaatatgtgctgtgggcctggatcagcagcgcatcggagggcccgacgcgggtgcgcagc
gccatgatgatcgcgatgtgggacacgttcgagcgccagggcgtggtgatcccgaagccc
gggccgtcgcacatcgtgctcgacaaggcgccgtaa
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