Rhodococcus sp. 2G: BO226_03475
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Entry
BO226_03475 CDS
T10983
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
rhzg Rhodococcus sp. 2G
Pathway
rhzg03030
DNA replication
rhzg03430
Mismatch repair
rhzg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rhzg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BO226_03475
03430 Mismatch repair
BO226_03475
03440 Homologous recombination
BO226_03475
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rhzg03032
]
BO226_03475
03400 DNA repair and recombination proteins [BR:
rhzg03400
]
BO226_03475
Enzymes [BR:
rhzg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BO226_03475
DNA replication proteins [BR:
rhzg03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BO226_03475
DNA repair and recombination proteins [BR:
rhzg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BO226_03475
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TerD
RNase_T
BRCT
Rv2179c-like
PTCB-BRCT
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
APE12037
LinkDB
All DBs
Position
762173..763939
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AA seq
588 aa
AA seq
DB search
MLPRDHRWVVVDVETSGVRPNAHRVLSVAALVLREDGSVEREFSTLVDPGCDPGPVHIHN
LTRERLAGSPRFEDIAGELAGILDGATIVAHNASFDYGFLDAEFRRAGTSLPAQHRLCTL
ALSRRLELDVPNYRLATLAQHWQVQQLQEHDAYDDARVLSEIFLRSAAMADNLQLPLPVV
NCRSRKSVYPASVPRVACQWKNPGRLVDDGLVQGMKVVISGSTVTPRVALANRLTDAGLD
VMNNASKQTSVVVCNDPTVQTAKIRKAMAEGIPVISEQQLEDLLTRVRPGEPKVATVVDI
IPPPEPQVVVAPQSWRLTGQKPKLWTGRKVLLLGGTHLQAVMMRSRLTQLGARPALNFTA
AVTDVLVLEGGEADKRMARVAARELPVLRPDDVDAAVEKGVVPPHMRVESWLTAPVLSRG
EVIDLPTDSHRWAVNVAWKAETAGDEFDLDVVAFLLGADEKVDTDDDFVFYNNPLYDDGV
VELTIDGSSEHCIRVDLAELPAECERIAIAAAIDGNRTFGELGAVSVGVDSDSGTAATFV
LDAGTTERTMVLAEIYRRAGKWRLRAVGQGYDDDLAALARRYGVDVDD
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atgttgccccgcgaccatcggtgggtggtggtcgacgtcgagacctcgggcgtgcgtccc
aacgcccaccgggtcctgagcgtcgccgccctcgtattgcgcgaggacgggtccgtggag
cgggagttctcgaccctcgtcgaccccggctgcgatccgggaccggtgcacatccacaac
ctcacccgggagcgcctcgccgggtcgccgcgattcgaggacattgccggtgaactggcc
gggatcctcgacggcgccacgatcgtcgcccacaacgcgtcgttcgactacggattcctc
gacgccgagttccgtcgggccggcacctcgcttccggcgcagcaccgtctgtgcacgctc
gcgttgtcgcgcaggctcgaactcgacgtccccaactatcgcctcgcgaccctcgcgcag
cactggcaggtccagcagctgcaggagcacgacgcctacgacgacgcgcgggtcctgtcg
gagatcttcctgcgcagcgccgcgatggccgacaacctgcagttgccgttgcccgtcgtc
aactgccgcagccgcaaatcggtgtatccggcatccgtcccgcgggtcgcgtgccagtgg
aagaacccgggtcgcctcgtcgacgacggcctcgtccagggcatgaaggtcgtgatcagc
ggttccaccgtcaccccgcgggtcgcgctcgcgaaccggttgaccgacgccgggctcgac
gtgatgaacaacgcgagcaagcaaaccagcgtcgtggtgtgcaacgacccgacggtgcag
accgccaagatccgcaaggcgatggccgaaggcatccccgtgatcagcgagcagcagctc
gaggacctgctgacgcgagtccggccgggcgaaccgaaggtcgcgacggtcgtcgacatc
attccgccgccggaaccgcaggtcgtggtggcgcctcagagttggaggttgaccgggcag
aagcccaagctgtggaccggacgcaaggtactgctgctcggcggcacgcacctgcaggcc
gtcatgatgcgttcgcgtctcacccagctcggtgcccgcccggccctcaacttcacggcc
gccgtcaccgatgtgctggtcctcgaaggaggagaggccgacaagcggatggcgcgggtc
gcagcgcgtgagctgcccgtcctccggcccgacgacgtcgatgccgcagtggagaaggga
gtcgtgcctccacacatgcgcgtggagtcgtggctgacggcgccggtgctgtcccgcggc
gaggtgatcgacctgccgaccgacagtcaccgctgggccgtgaacgtcgcgtggaaggcc
gagacggccggcgacgagttcgacctcgacgtcgtcgccttcctgctcggagccgacgaa
aaggtcgacaccgacgacgatttcgtcttctacaacaacccgctctacgacgacggcgtc
gtcgaactgaccatcgacggttcgagcgagcactgcatccgtgtcgatctcgcagagctt
cccgccgaatgcgaacgcatcgccatcgccgcggccatcgacggcaaccgcaccttcggc
gaactcggcgcagtgtcggtcggcgtcgacagcgacagtggcaccgccgcgacgttcgtg
ctcgacgccggcaccaccgaacgcaccatggtcctcgccgagatctaccgccgcgccggc
aagtggcggctgcgcgcggtggggcaggggtacgacgacgacctcgcggccctcgcacgc
cggtacggcgtggatgtcgatgactga
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