Rhodococcus sp. 2G: BO226_05400
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Entry
BO226_05400 CDS
T10983
Name
(GenBank) recombinase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
rhzg Rhodococcus sp. 2G
Pathway
rhzg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rhzg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BO226_05400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rhzg03019
]
BO226_05400
03400 DNA repair and recombination proteins [BR:
rhzg03400
]
BO226_05400
Enzymes [BR:
rhzg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BO226_05400
Messenger RNA biogenesis [BR:
rhzg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BO226_05400
DNA repair and recombination proteins [BR:
rhzg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
BO226_05400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_30
DprA_WH
SWI2_SNF2
Motif
Other DBs
NCBI-ProteinID:
APE08721
UniProt:
A0A1J0TMF5
LinkDB
All DBs
Position
complement(1174017..1176230)
Genome browser
AA seq
737 aa
AA seq
DB search
MTNSTDLLRDDAEHLLRELAGPDARLRDDQWVAIEALVVHRRRALVVQRTGWGKSAVYFI
SAKLLRRQGRGPTVIVSPLLALMRNQVAAAERAGVHAATINSGNVTEWAAIHERIAAGEV
DVLLVSPERLNNPDFRDQVLPSLARDAGLVVVDEAHCVSDWGHDFRPDYRRIRTLVAELG
DDIPVLATTATANDRVVADIAAQLGVGGGSDLGGSSNSGSDGTLVLRGGLDRPSLHLSVV
RIDEPARRAAWLAQHLKDLPGSGIVYALTVSAARDLAALLTDHGFAVAAYTGQTEPTERE
QLEADLLDNKVKALVATSALGMGFDKPDLGFVVHLGAPSSPISYYQQVGRAGRSTERAEV
VLLPGPEDRRIWQWFASVAFPDEALVRRVIAALDTERPVSTPALEPRVDLTRSRLEMVLK
VLDVDGAVKRVKGGWIATGQPWMYDEERYGRLEEARAAEQEAMLEYERTTECRMVFLRRQ
LDDPDLDTRSPGCDHTAGGPGCDHTAGGPGCDHTAGGPGCGRCDNCIGSRWETSVGDDEV
ARTRARLERPGVDLPPRRQWPTGMSTLGIPLSGRITDGPHPGRVLGRLSDLGWGPRLREL
LDGPDREVPKAVVDASIAVLAAWDWEERPTAVMAMDSPTHPLLVESLAFRLAQIGRLRDL
GVLRRRSGNTEPTAANSAYRVAALIDAWERPDNLGSSGPILLVDAVTDTGWTFTMAARTL
VAAGADAVLPYALASPK
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atgacgaactccaccgacctgttgcgcgacgatgccgagcacctcctccgcgagctggca
ggccccgatgcccggctgcgcgacgaccaatgggtcgcgatcgaggcgctcgtggtacac
cgtcgccgcgccctcgtcgtccagcgcacaggctggggaaagtcggccgtctacttcatc
tccgccaaactgctgcgccggcagggccgcggtcccacggtgatcgtctcgccgctgctc
gccctgatgcgcaaccaggtcgcggccgccgagcgggcgggcgtccacgccgcgaccatc
aactccggcaacgtgacggaatgggcggcgatccacgagcggatcgcggcgggtgaggtc
gacgtcctcctcgtcagccccgaacgcctcaacaaccccgacttccgcgaccaggtcttg
ccctccctcgcccgcgacgccggattggtggtcgtcgacgaggcgcactgcgtgtcggac
tggggtcacgacttccggcccgactaccgccgcatccgcaccctcgtcgccgaactcggc
gacgacatcccggtcctggcgacgaccgcgaccgccaacgaccgggtggtcgccgacatc
gccgcccagctcggtgtcggcggaggcagcgacctcggtggaagcagcaattccggctcc
gacggcacgctcgtgctgcgcggcggcctcgaccgtccgtcgctgcacctgtcggtggtg
cggatcgacgaaccggcacgacgcgcagcatggctcgcgcaacatctgaaggatctgccg
ggctcgggcatcgtgtacgcgctgacggtctccgccgcccgcgacctcgcggcgctgctc
accgaccacggctttgcagtggcggcatacaccggtcagaccgaaccgaccgaacgtgaa
cagctcgaggccgatctcctcgacaacaaggtcaaggcgctcgtcgcgacctcggcactc
ggcatgggcttcgacaagcccgacctcggcttcgtggtgcacctcggcgctccctcgtcc
ccgatctcctactaccagcaggtcgggcgtgcgggtcgctccaccgaacgcgccgaggtg
gttctgctccccggcccggaggaccgccggatctggcagtggttcgcctcggtcgccttc
ccggacgaggcactcgtacgccgtgtgatcgcagcgctcgataccgaacggccggtatcg
acacccgcgctcgaaccgcgggtcgacctcacgcgctcccgcctggagatggtcctcaag
gtcctcgacgtcgacggagcggtgaagagggtcaagggtggctggatcgccaccgggcag
ccctggatgtacgacgaggagcgctacgggcggctcgaggaggcgcgcgccgcggaacag
gaggcgatgctcgaatacgaacgcaccaccgaatgccgcatggtcttcctccgccgtcag
ctcgacgaccccgatctcgacacccggagccccggctgcgatcacaccgccggaggcccc
ggctgcgatcacaccgccggaggccccggctgcgatcacaccgccggaggccccggctgc
ggccggtgcgacaactgcatcggctcccggtgggagacgtccgtcggcgacgacgaggtc
gcccgcacccgcgctcggctcgaacgccccggtgtggatctgccgccgcgccggcagtgg
cccacgggaatgtcgaccctcgggatcccgctgtcgggccggatcacggacggtccgcac
cccgggcgagtgctgggcaggctgtcggatctgggatggggaccgcgactgcgcgaactg
ctcgacggaccggaccgcgaagtgccgaaggcggtggtcgacgcgtcgatcgcggtgctc
gccgcgtgggactgggaggagcggcccaccgccgtcatggccatggactcccccacacat
cccctgctcgtcgagtcactcgcgttccgattggcacaaatcggacgattacgagatcta
ggtgtattgcgacgccgaagcgggaatacggagccgacggcagcgaactcggcatatcgg
gtcgccgcactgatcgatgcgtgggagcgacccgacaacctcgggtcgagtggtccgatc
cttctcgtcgatgcggtgaccgacaccggctggacgttcacgatggcggcgagaactctc
gtcgcggcgggagccgacgcggtgttgccgtacgcactcgcgagcccgaagtaa
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