Rhodococcus sp. 2G: BO226_05425
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Entry
BO226_05425 CDS
T10983
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
rhzg Rhodococcus sp. 2G
Pathway
rhzg03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rhzg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BO226_05425
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhzg03400
]
BO226_05425
Enzymes [BR:
rhzg01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
BO226_05425
DNA repair and recombination proteins [BR:
rhzg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
BO226_05425
Prokaryotic type
BO226_05425
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
APE08725
LinkDB
All DBs
Position
1180456..1181184
Genome browser
AA seq
242 aa
AA seq
DB search
MADTVDTQSADGGADEPRAGRPLSELVDPGWARALEPVAGDITAMGQFLRAELAAGRSYL
PSGPNVLRAFTQPFESVRVLIVGQDPYPTPGHAVGLSFSVAPTVRPIPRSLANIYREYTD
DLGLPQPSTGDLSPWTEHGVLLLNRVLTVAPGQPASHRGKGWEAVTEQAIRALVARGTPL
VAILWGRDAATLEPMLGGVPTVKSAHPSPLSASRGFFGSRPFSRANALLVEQGGEPVDWR
LP
NT seq
729 nt
NT seq
+upstream
nt +downstream
nt
gtggccgacaccgtcgacacacagtccgcggacgggggagcggacgagccccgtgccggt
cggcccctgtccgaactcgtcgacccgggctgggcgcgagcactcgaacccgtcgcaggt
gacatcaccgcgatggggcagttcctccgcgccgaactcgccgcgggccgcagttacctg
ccgtccggtccgaacgtgctgcgtgccttcacacagccgttcgagtccgtccgcgtcctg
atcgtcgggcaggatccctatcccactccgggtcacgctgtgggactgagcttctcggtg
gctccgaccgtccggccgatcccgcgcagtctcgccaacatctaccgcgagtacaccgac
gatctcggtctgccgcagccctccacgggcgacctgtcgccgtggaccgagcacggtgtc
ctgttgctcaaccgggtcctcaccgtcgcgccgggccagccggcctcgcatcgcggcaag
ggctgggaggccgtcaccgagcaggcgatccgcgcgctggtcgcgcgcggtaccccgctc
gtcgcgatcctgtggggccgcgacgcggcgaccctcgaacccatgctcggtggtgtgccc
accgtgaagtcggcgcacccgtccccgctgtcggcctcacgcggattcttcgggtcgcgt
ccgttcagccgcgcgaacgccctgctcgtcgagcagggcggcgaaccggtggactggcga
ctgccctga
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