Rhodococcus sp. ZPP: HYG77_01855
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Entry
HYG77_01855 CDS
T11458
Name
(GenBank) DEAD/DEAH box helicase
KO
K03727
ATP-dependent RNA helicase HelY [EC:
5.6.2.6
]
Organism
rhzp Rhodococcus sp. ZPP
Brite
KEGG Orthology (KO) [BR:
rhzp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rhzp03019
]
HYG77_01855
Enzymes [BR:
rhzp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
HYG77_01855
Messenger RNA biogenesis [BR:
rhzp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
HYG77_01855
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DSHCT
SH3_HelY
DEAD
ResIII
Helicase_C
DEXQc_Suv3
MTR4-like_stalk
AAA_22
DMP19
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
QTJ64466
LinkDB
All DBs
Position
complement(405432..408170)
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AA seq
912 aa
AA seq
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MAVTTGEATGGTELDVFSALLGFVLDPFQINACRALEAGHGVLVCAPTGAGKTVVGEFAV
HLALASGRKCFYTTPIKALSNQKYAELVRRYGKNSVGLLTGDSSINSDAPVVVMTTEVLR
NMLYADSPALRGLSHVVMDEVHFLADRFRGAVWEEVILHLSEDVRLVSLSATVSNAEEFG
AWMETVRGDTTVVVDETRPIPLWQHIMVGRRLFDLFDTRARTTDGLRDLVVDQDLVRHVK
QRQALERVDPWESRERGRRGGRGGVPSDFRPLPRPEVIARLDDEGLLPAITFIFSRAGCD
AALAQCLRSRLDLTSAEQVAEIRTIIDAHTGDLPKADLEVLGYWEWRKALERGLAAHHAG
MLPAFRQTVEELFVKGLVRAVFATETLALGINMPARTVVLERLVKYNGEAHAELTPGEYT
QLTGRAGRRGIDVEGHAVVLWQPGVEPVDVAGLASTRTFPLRSSFRPGYNMTINLIDRMG
APESRALLERSFAQFQADRSVVGLTRGIERNEAAMATLRERLGGEDGEYFEYARLREELS
SRERALERQGRSERRDAAVESLTSLRRGDVIAIPVGRHSGLAVVLEPDRDPTDPKPLILT
EGKWAGRVSAGDFPEPARSLGSMRMPRRVDHHTARVRRDLASALRSTGIVVPGRRKKKKA
GAADDAEIARLRRAIRQHPCHSWPDREQLSRIGDRYNRLARETETMRQKVAATTNSLART
FDRILALLTERGYVTAGEHPEATEDGARLSRIYSESDLLVAECLRQGVWKGLGPAELAAV
VSSVVFESRREGDTIEQGGPGALRYALDETVRVWRDLRAEEIRFKLPPTREPDLGFASAI
FQWASENSLVDALIAAGDQGRALSAGDFVRWCRQVIDLLEQVRSTSPDPGVSRAAGRAVS
AIRRGVVAVDAA
NT seq
2739 nt
NT seq
+upstream
nt +downstream
nt
gtggctgtaacaacaggtgaggcaaccggcggcaccgagctcgacgtgttctcggcgctg
ctcggtttcgtcctcgatcccttccagatcaatgcttgccgcgcgctcgaggccgggcac
ggtgtcctcgtgtgcgcaccgaccggtgcaggcaagacggtggtcggtgagttcgccgtg
cacctggccctcgcgtcggggcgcaaatgcttctacaccacgcccatcaaggcgctgagc
aaccagaagtacgccgagttggtgcgcaggtacggcaagaattcggtgggtttgctgacc
ggcgattcgagcatcaactccgacgcccccgtggtggtgatgaccaccgaggtcctgcgc
aacatgctgtacgccgattcgccggcgttgcgcggtctgtcccatgtggtgatggacgaa
gtgcactttttggcggatcggttccgcggcgccgtgtgggaagaggtgatcctgcacctg
tccgaggacgtgcggctggtcagcctgtcggcgacggtcagcaacgccgaggaattcggt
gcctggatggaaaccgtccggggcgataccaccgtggtcgtcgacgaaacccgcccgatc
ccgctgtggcagcacatcatggtcggccgtcgactgttcgacctcttcgacacccgggcc
cgcaccacggacggcctccgcgacctggtggtcgaccaggacctggtccggcacgtcaaa
cagcggcaggcactcgagcgggtcgacccttgggagtcgcgtgaacgtgggcggcgagga
ggccgaggtggggtgccgagcgacttccgcccgctgccgcgtccggaggtcattgcccgc
ctcgacgacgagggactgctcccggccatcactttcatcttcagcagggccggctgcgac
gccgccctggcgcaatgcctgcggtcgcggctcgacctgacgagtgccgagcaggtagcc
gagatccgcacgatcatcgacgcccacaccggtgacctaccgaaggcggatctcgaagtg
ctcggctactgggagtggcggaaggcgctcgagcggggactcgccgcacaccacgccggt
atgctgcccgcgttccgtcagaccgtcgaggagttgttcgtcaaaggtctggtccgcgcg
gttttcgccacggagacattggcgctcggcatcaacatgcccgcccgcacggtggtcctg
gaacggctcgtgaagtacaacggcgaagcgcacgccgaattgacgccgggggagtacacc
cagctcaccggccgcgccggtcgccgcggcatcgacgtcgaggggcacgcggtggtgttg
tggcagcccggggtggagccggtggacgtcgcgggcctggcctccacccgtaccttcccg
ctacgcagttcgttccgtcccggctacaacatgacgatcaacctgatcgaccggatgggt
gctccggaatcgcgggccctgttggagaggtcgttcgctcagttccaggccgaccgttcc
gtggtcgggctgacgcggggtatcgagcgcaacgaggcggcgatggccaccctgcgggag
cggctcggcggcgaagacggcgagtacttcgaatacgcgcggctgcgggaagaactgagc
agccgagagcgggctctcgagcgacagggccgcagcgagcgccgcgacgccgccgtcgag
tccctcacctcgttgcggcgcggtgacgtgatcgccattccggtgggcaggcattcaggt
ctggccgtcgtcctggaaccagacagggacccgaccgatccgaagccgctgatcctgacg
gaagggaagtgggcgggccgggtgtcggccggcgacttccccgagcccgcgcggtcgctg
ggctcgatgcggatgcctcgccgagtcgaccatcacaccgcccgggttcgccgcgatctg
gcttcggcgttgcgcagcaccggcattgtcgtgccgggacgccgcaagaagaagaaggcg
ggcgccgccgacgacgcggagatcgcgcggctgcggcgggcgatccgtcagcatccctgc
cactcctggcccgaccgtgaacagttgagccggatcggtgatcggtacaaccggctggcc
cgcgagaccgagaccatgcggcagaaggtggccgccacgaccaactcgttggcccgcacc
ttcgatcgcatcctggcgctgctgaccgaacgtgggtatgtcactgcgggtgagcatccg
gaggccaccgaggacggcgcccgactgagccgaatctattcggagagtgaccttctcgtc
gccgagtgcctgcgccagggcgtgtggaaggggctgggtcccgccgagctcgccgctgtc
gtctcgtccgtcgtcttcgaatcgcggcgcgaaggcgacaccatcgaacagggtggcccc
ggggcgttgcggtacgcgctcgacgagacggtgcgggtgtggcgggatctgcgggccgag
gagatccggttcaaactgccgccgacgcgtgaacccgacttggggttcgcctcggccatt
ttccaatgggcgagcgagaattcgttggtcgacgcgttgatcgccgccggcgatcagggg
cgtgctctgtcggcgggtgacttcgtccgctggtgccgacaggtgatcgatctgctcgag
caggtccgctcgacgtcgccggaccccggggtgagcagggcggcaggccgggcggtgtcc
gcgatccgtcgtggtgtcgtcgcggtggatgcagcgtga
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