Rhodococcus sp. ZPP: HYG77_01880
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Entry
HYG77_01880 CDS
T11458
Symbol
pafA
Name
(GenBank) Pup--protein ligase
KO
K13571
proteasome accessory factor A [EC:
6.3.1.19
]
Organism
rhzp Rhodococcus sp. ZPP
Brite
KEGG Orthology (KO) [BR:
rhzp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
rhzp03051
]
HYG77_01880 (pafA)
Enzymes [BR:
rhzp01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.1 Acid-D-ammonia (or amine) ligases (amide synthases)
6.3.1.19 prokaryotic ubiquitin-like protein ligase
HYG77_01880 (pafA)
Proteasome [BR:
rhzp03051
]
Prokaryotic proteasome
Bacterial regulatory particles
HYG77_01880 (pafA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pup_ligase
Motif
Other DBs
NCBI-ProteinID:
QTJ64471
LinkDB
All DBs
Position
complement(411760..413118)
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AA seq
452 aa
AA seq
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MQRRIMGIETEFGVTCTFHGHRRLSPDEVARYLFRRVVSWGRSSNVFLRNGARLYLDVGS
HPEYATAECDNLIQLVNHDRAGERVLEELLIDAEQRLAEEGIGGDIYLFKNNTDSAGNSY
GCHENFLVARAGEFSRISDVLLPFLVTRQLICGAGKVLQTPKAATFCLSQRAEHIWEGVS
SATTRSRPIINTRDEPHADAEKYRRLHVIVGDSNMSESTTMLKVGTAALVLEMIEAGVSF
RDFALDNPIRAIREVSHDVTGRRPVRLAGGRQASALDIQREYHTRAVEHLQNREPDAQVS
QVVDLWGRMLDAVESQDFAKVDTEIDWVIKRKLFQRYQDRDGFELADPKIAQLDLAYHDI
KRGRGVFDLLQRKGLVKRITEDETIEAAVDTPPQTTRAKLRGEFITAAQEAGRDFTVDWV
HLKLNDQAQRTVLCKDPFRSVDERVERLIASM
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
gtgcagcgacgaatcatgggtattgagactgagttcggtgtgacctgcaccttccatggt
cacaggcgactgagccccgacgaggttgcgcgctacctgttccggcgggtggtgtcgtgg
ggccgtagttccaacgtgttcctccggaacggtgcccgcctgtatctggacgtcggctcg
caccccgagtacgcgacggcggagtgcgacaacctgatccagttggtcaatcacgaccgg
gcgggggagcgggttctcgaggaactgctcatcgacgcggagcagcggctcgccgaagaa
ggcatcggcggcgacatctacctgttcaagaacaacaccgactccgccggtaactcgtac
ggctgccacgagaacttcctggtggcgcgggccggggagttctcccggatctccgacgtt
ctgttgccgttcctggtgacgcggcagctgatctgcggtgcgggcaaggtcctgcagact
cccaaggcggccaccttctgcctgtctcagcgggcggagcacatctgggagggggtgtcc
tcggcgactacccggtcgcggcccatcatcaatacgcgcgacgaaccgcacgccgacgcc
gagaagtaccgtcgcctccacgtgatcgtcggtgattccaacatgtcggagtcgaccacc
atgctgaaggtgggaaccgcggccctcgtcctggagatgatcgaggccggggtttcgttc
cgcgatttcgcgctcgacaacccgatccgcgccattcgcgaggtcagtcatgacgtcacc
ggacgtcgcccggtgcggttggccggcggccggcaggccagtgcactggacattcagcgc
gagtaccacacgcgcgcggtggaacacctgcagaaccgcgaacccgacgcacaggtcagc
caggtggtggatctctggggccggatgctcgatgcggtggagtcgcaggacttcgccaag
gtggacacggagatcgactgggtgatcaagcgcaagctgttccagcgctaccaggaccgg
gacgggttcgagcttgccgacccgaagattgcacagctcgacctggcgtaccacgacatc
aaacgtggtcgcggtgtgttcgacctgctccagcgcaaggggctggtgaagcggatcacc
gaggacgagacgatcgaagctgccgtggacaccccgccgcagacgacccgcgcgaagctg
cgcggtgagttcatcaccgcagctcaggaggccggccgcgacttcacggtcgactgggtg
catctcaagctcaacgatcaggcgcagcggacggtcctgtgcaaggacccgttccggtcg
gtcgacgaacgggtggagcggttgattgcctcgatgtag
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