KEGG   Rhodococcus sp. ZPP: HYG77_02450
Entry
HYG77_02450       CDS       T11458                                 
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
  KO
K03701  excinuclease ABC subunit A
Organism
rhzp  Rhodococcus sp. ZPP
Pathway
rhzp03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:rhzp00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    HYG77_02450 (uvrA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rhzp03400]
    HYG77_02450 (uvrA)
DNA repair and recombination proteins [BR:rhzp03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     HYG77_02450 (uvrA)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      HYG77_02450 (uvrA)
SSDB
Motif
Pfam: UvrA_inter UvrA_DNA-bind ABC_tran AAA_29 AAA_21 SMC_N AAA_16 RsgA_GTPase AAA_25 nSTAND1 AAA_22 NACHT DnaJ_CXXCXGXG Viral_helicase1 ScfRs NTPase_1 ExoX-like_C cobW
Other DBs
NCBI-ProteinID: QTJ64572
LinkDB
Position
complement(535627..538647)
AA seq 1006 aa
MADRLIVRGAREHNLRGVDLDLPRDSLIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSA
YARQFLGQMDKPDVDFIEGLSPAVSIDQKSTNRNPRSTVGTITEVYDYLRLLYARAGTAH
CPVCGEQIARQTPQQIVDQVLDMEEGIRFQVLAPVVRTRKGEFVDLFDQLNVQGYSRVRV
DGVVYPLTDPPKLKKQEKHDIEVVVDRLTVKASSKQRLTDSVETALRLAEGIVVLDFVDR
EENAADRERRFSEKLACPNGHALSIDDLEPRSFSFNSPYGACPECTGLGIRKEVDPDLVV
PDPELSLEDGAIAPWSMGQSSEYFGRLLSGLGDILGFDMKTPWNKLPAKARRAILEGSEE
QVHVRYKNRYGRTRSYYAEFEGVMPFLHRRLDQTESDQMKERYDGYMRDTPCPACAGARL
RPEILSVTIASEKFGKKSIAEVCELSISDCADFLNSLTLGSREEAIAGQVLKEVQARLGF
LLDVGLEYLSLARAAGTLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNRRLIE
TLTRLRDLGNTLIVVEHDEDTIRTSDWVVDIGPLAGEHGGKVVHSGPYEELLECEESLTG
AYLSGRSHIEVPAIRRPVDRKRQVTVIGAREHNLGGIDVSFPLGVLTAVTGVSGSGKSTL
VNDILATVMANKLNGARQVPGRHTRINGLDQLDKLVQVDQSPIGRTPRSNAATYTGVFDK
IRTLFASTTEAKVRGYQPGRFSFNVKGGRCEACSGDGTLKIEMNFLPDVYVPCEVCHGAR
YNRETLEVHYKGKTIAEVLDMPIEEAADFFQPITSIHRYLKTLVEVGLGYVRLGQPAPTL
SGGEAQRVKLAAELQKRSTGRTVYILDEPTTGLHFEDIRKLLGVVNGLVDKGNTVIVIEH
NLDVIKTSDWVVDMGPEGGSGGGTVVAQGTPEEVAQVPESYTGKFLDSVLAVTPAQKKKP
ARAGKSAKGASAKSPASPKAGSAKATTAVKSVTSRKRAPKNTAAVG
NT seq 3021 nt   +upstreamnt  +downstreamnt
gtggcggatcgccttatcgtgcggggtgcccgtgagcacaatctgcgaggggtcgatctc
gatctaccccgcgacagcctgatcgtgttcaccggcttgtcgggctcaggtaagtcgagc
ctggcgttcgacacgatcttcgccgagggtcagcgacgctatgtcgagtcgctgtcggca
tacgcacgccagttcctcggtcagatggacaagccggacgtcgacttcatcgagggcttg
tcgcccgcggtgtccatcgaccagaagtcgaccaaccggaacccgcgttccaccgtgggc
acgatcaccgaggtctacgactaccttcgactcctctacgcgcgggcaggcacggctcac
tgcccggtgtgtggtgagcagatcgcccggcagacgccgcagcagatcgtcgaccaggtg
ctcgacatggaagagggcatccgctttcaggtactcgctccggtggtccgcacccgcaaa
ggtgagttcgtcgacctcttcgatcaactgaacgtccagggttattcgcgtgtgcgggta
gacggcgtggtgtatccgctcaccgatcctccgaagctgaagaagcaggagaagcacgat
atcgaggtggtcgtcgaccgtctcaccgtcaaggccagttccaagcagcgcctcacggat
tccgtcgagacggcactgcggctcgccgaaggcatcgtggtgctcgacttcgtcgatcgc
gaagaaaatgccgccgatcgtgaacgccgtttctcggagaagctcgcatgccccaacggc
catgccctgtccatcgacgacctcgagccgcgttccttctcgttcaactccccgtacggt
gcctgcccggaatgcaccggtctcggcatccgcaaggaagtcgaccccgaccttgtcgtg
ccggaccccgagttgtctctcgaggacggtgccatcgcaccctggtcgatggggcagagt
tccgagtacttcggacggctgttgtccggcttgggagacatcctcggcttcgatatgaag
acgccgtggaacaagcttccggcgaaggcgcgccgagccatcctcgagggtagcgaggag
caggtgcacgtccggtacaagaaccggtacgggcgtacccgttcgtactacgccgagttc
gaaggggtcatgcccttcctgcaccgccgcctcgaccagaccgagtcggatcagatgaag
gagcggtacgacggctatatgcgcgacacaccgtgtcccgcgtgtgccggcgcacgtctg
cgtccggaaattctctccgtcaccattgcgagcgagaagttcggcaagaagtcgatcgct
gaagtgtgtgagctgtcgatctccgattgtgccgatttcctcaacagcctcacattgggc
agtcgcgaggaagcaattgccggtcaggtgctgaaggaagttcaggcccgtctcggattc
ctcctcgacgtcggactcgaatacctgtccctcgcgcgggccgcaggcacgctgtccggt
ggtgaagcgcagcgcatccggctcgccacgcagatcggctccggcctggtgggtgtgctg
tacgtgctggacgagccgtccatcggcctgcatcagcgcgacaaccgtcgactcatcgag
acccttacgcgtctgcgggacctcggtaacactctcatcgtggtcgagcacgacgaggac
accatccggacctcggactgggtcgtcgacatcggcccgctcgccggtgaacacggaggc
aaggtcgtacacagtggcccgtacgaggaactgctcgagtgcgaggagtcgctgaccggc
gcctacctgtcgggccgcagccacatagaggttccggccattcggcgtcccgtggaccgc
aaacgccaggtcaccgtcatcggcgcgcgggaacacaacctcggcggtatcgatgtgagc
ttcccgctgggtgtgctcacggcggtcaccggtgtctccggctccggcaagtcgacactc
gtcaacgacattcttgccaccgtcatggccaacaaactcaacggtgcgcggcaggtgccc
ggtcgtcacacccgcatcaacgggctcgatcagctcgacaagctggtgcaggtggaccag
tcgccgatcggacgcacaccgcgatcgaacgcggccacgtacaccggcgtgttcgacaag
atccgcactctgttcgcgtccacgaccgaagcgaaagtgcgcggataccagcccggcaga
ttctcgttcaacgtcaagggcggtcggtgcgaggcatgctccggcgacggcacactgaag
atcgaaatgaacttcctgcccgacgtctacgttccgtgcgaggtgtgccacggcgcgcgg
tacaaccgggagaccctcgaagtgcactacaagggcaagaccatcgcagaggtgctcgac
atgcccatcgaggaagccgcggacttcttccagccgatcacctcgatccaccgctacttg
aagacgctggtggaggtcggcctcgggtatgtgcgcctcggtcagccggcacccacgttg
tccgggggtgaggcccagcgcgtgaagctcgccgcggaactgcagaagcggtcgacgggg
cgcacggtgtacatcctcgacgagcccacgactggtctgcacttcgaggacatccgcaag
ctgctcggggtcgtcaacgggttggtcgacaagggcaacaccgtcatcgtcatcgagcac
aacctcgacgtgatcaagacgtccgactgggtggtcgacatgggaccggaaggtggatcc
ggcgggggaacagtggtggcccagggcaccccggaagaggtggctcaggtccccgagagc
tacaccgggaagttcctcgacagcgttctcgcggtgacacctgcgcagaagaagaagccg
gccagagcgggcaagtcggcgaaaggtgcttcggcgaaatccccggcctcgccgaaggcc
ggttccgcgaaagccaccactgcggtgaagtcggtgacgtcgcggaagcgggcaccgaag
aacaccgcggcagtgggctga

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