Rhodococcus sp. ZPP: HYG77_03240
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Entry
HYG77_03240 CDS
T11458
Name
(GenBank) DEDD exonuclease domain-containing protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
rhzp Rhodococcus sp. ZPP
Pathway
rhzp03030
DNA replication
rhzp03430
Mismatch repair
rhzp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rhzp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HYG77_03240
03430 Mismatch repair
HYG77_03240
03440 Homologous recombination
HYG77_03240
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rhzp03032
]
HYG77_03240
03400 DNA repair and recombination proteins [BR:
rhzp03400
]
HYG77_03240
Enzymes [BR:
rhzp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HYG77_03240
DNA replication proteins [BR:
rhzp03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HYG77_03240
DNA repair and recombination proteins [BR:
rhzp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HYG77_03240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
GIY-YIG
UVR
DEDDh_C
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
QTJ69614
LinkDB
All DBs
Position
704193..705953
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AA seq
586 aa
AA seq
DB search
MQPKFEQLRFDELDTPLRDTTFVIVDLETTGGRPGEDAITEIGAVKVRGGEVLGEMATLV
DPGRSIPPHIVEITGITTAMVVDAPRIERVLPAFLEFARGSVLVAHNAPFDTGFLKAAAA
ATDTPWPKFTVLCTVKLARRVLTRDEAPSVKLSSLARLFDVSTQPTHRALDDARATVDVL
HALIDRVGNQGVHSLTELVDYLPDVSSHQRAKRTLASHLPHAPGVYLFRGPSDEVLYVGT
ATDLRRRVRNYFTGSETRGRMKEMVALTTRIDHVECSHALEAGVRELRLLAAHTPPYNRR
SKYPKRGWWITLTVEAFPRLSVVRTPTPDSLGPFRSRSTAVEVAETLAEYCVLRTCTTRI
PKGREHGPQCPPRELAPCPAAVQGLKTEDDYSPGPRLFRHLLRGADDTPLRRMRTRLDAL
AANELFENAARLRDRTADVALALRRMQRLAALTALEEIVAARRAATGGWEFAVIRHGRLA
SSGRARRGIHPMPVVEALVLAAETVVPDDAPLRGASPEEAGLLARWLDSEGTRIVSASAG
YCEPARGAGSWAEWCERARAGSEPTPEPESRAPVPDAVPHHIGWHS
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
gtgcaaccgaagttcgagcaactgaggttcgacgagctcgacaccccgctgcgagatacc
accttcgtgatcgtcgatctcgaaacgaccggtggacggcccggggaggacgcgatcacc
gagatcggcgccgtgaaggtgcgcggcggcgaagtactcggtgagatggccaccctcgtg
gatccgggtcgctccatcccgccgcacatcgtggagatcaccggaatcaccacggcgatg
gtcgtggacgccccgcgtatcgagcgggtactgcccgcctttctggaattcgcccgcggc
tcggtgctggttgcgcacaacgctcccttcgacaccggtttcctcaaggccgccgcggcg
gccaccgacaccccctggcccaagttcacggtgctgtgcacggtcaagctggcgcgccgc
gtcctcacccgcgacgaagcaccgtcggtgaagctgtcctcccttgcccggctcttcgac
gtcagcacacagcccactcaccgcgcactcgacgacgcccgcgccaccgtcgacgtcctg
cacgctctgatcgatcgggtcggcaaccagggagtgcacagtctcaccgaactcgtcgat
taccttcccgacgtttcctcccaccagcgagccaagcgcaccctcgccagtcacctaccg
cacgccccgggggtgtacctgttccgtggcccctcggacgaggtgctctacgtcggaacg
gcgacagatctgcggcgccgggtacgcaattacttcaccgggtccgagacgcgtggacgg
atgaaggagatggtggcgctcaccacgcggatcgatcatgtggagtgctcgcacgcgctc
gaggccggtgtccgtgaactgcgcctactcgccgcacacacgccgccgtacaaccggcgg
tcgaagtatccgaagcgcggatggtggatcacactcacagtcgaggcctttccccgactg
tccgtcgtacgcactcccactccggattcactcggcccgttccgctcccgctccaccgcg
gtcgaggtcgcagagacgctcgccgagtactgcgtcttgcgaacctgcaccacccggata
ccgaaaggacgcgaacatggaccgcaatgtccgccgcgcgaactcgccccgtgcccggcg
gccgtgcagggtctgaaaaccgaggacgactacagccccggcccccgactcttccgtcac
ctgctgcgaggcgccgacgacacgccactgcggcggatgcgcacacggctggacgcgctc
gcggcgaacgagctgttcgagaacgccgcccgactgcgcgaccgcactgccgacgtggcc
ctcgcactgcgcagaatgcaacggctggctgccctcaccgcgctcgaggaaatcgtggcg
gcccgccgggccgccaccggaggctgggagttcgccgtgatccggcacggccggctcgca
tcctccgggcgtgcgcggcgcggaatacacccgatgccggtggtcgaggctctggtgctc
gctgcagagaccgtcgttccggatgatgcgccgctccgcggggcctcgcccgaggaagcc
ggtctgctggcccgctggctcgatagcgagggcacccgcatagtcagcgcctccgcggga
tactgcgaacccgcgcggggggccggatcgtgggcggagtggtgcgagcgggcccgcgcc
ggcagtgaaccgacacccgaaccggagtcccgagcgcctgtgcccgacgctgttccccac
cacatagggtggcactcatga
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