Rhodococcus sp. ZPP: HYG77_22170
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Entry
HYG77_22170 CDS
T11458
Name
(GenBank) TIR domain-containing protein
Organism
rhzp Rhodococcus sp. ZPP
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Beta-prop_WDR3_1st
Beta-prop_WDR5
Beta-prop_THOC3
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
Beta-prop_WDR3_2nd
WD40_Gbeta
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR90_POC16_2nd
EIF3I
ANAPC4_WD40
Beta-prop_EML
Beta-prop_IFT122_1st
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_1st
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR75_1st
Beta-prop_Aladin
Beta-prop_VPS8
WDR90_beta-prop_4th
Beta-prop_TEP1_C
Beta-prop_SCAP
Beta-prop_IFT140_1st
Beta-prop_WDR41
NBCH_WD40
Beta-prop_EIPR1
Beta-prop_RIG_2nd
TIR_2
eIF2A
Beta-prop_WDR35_TULP_N
Tricorn_N
Beta-prop_DCAF4
Beta-prop_NOL10_N
Cytochrom_D1
TIR
ThsB_TIR
Motif
Other DBs
NCBI-ProteinID:
QTJ68018
LinkDB
All DBs
Position
complement(4771377..4774247)
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AA seq
956 aa
AA seq
DB search
MCAQAAQVPRQQQTRGEEERFEYDAFISYAHDDRPVAAGIQKGLHRIGRRMGQLHALRVF
RDATDLIASPDLWGRVTEAMGRARYLIVVLSPHSVASGWVNKEVTHWLERHGPDRLLFVV
TGGHLTWDEASGRFDPDRSDVALPVLTQPGILAAEPFYVDVTEDAPWDPASPMFREKITD
LAAPIHGKPKYALASEDLREQRRFRRLRRAAITGLVLLTVLAVAAATLAFVQRQESIRQR
NQAIAVRLVSEAQSMLAGARPGGDARALKQILAAQSIGSESEDAALLDAMLARKELLDIA
ETTATDVKDIALSPDERRIVTGGADGTVRLWEADTGKPIDPPMTGNRGEVVIVRFSPDGR
RIASGGATTVRVWNADTGAPLGTPMTVALGEVTSLEFSPDGRRIVTGSSEMTSSGLVNHG
SVQVWNADTGAPLGAPMTEHAGMILSVAFAPDGRRLVVGSGGPVHGAVRVWDADTGAPLG
LPMTEHDGMVLSVAFAPDGQRIVSGGADGAVRLWNADTGVPIGEPMTGHAGAVASVAFAP
DGTRIVSGGADGTVRLWDADTGAPIGEPLTGHESWVLSVTFNPDGQRVISGGGGEGTVRV
WDIEIGSAGQGSVLSVAFAPDGRRFVSGGSDGTLQLWDPDISAPIGEPISGQGVVTSVAF
APDGRRIVSGSSAPAANGTAAQSGTVQLWDADTRQPIGEPMIGHQNFVSSVAFAPDGRRI
ASGGIDGTIRLWDADTRQPIGEPMTGHQDAVVSVAFAPDGRQIASSGSDGTIRLWDADTR
QPIGEPMTGHHGEVTSVAFAPDGERIASSGIDSTIRLWDPETRQPVGEPLNGQAGPLASV
AFAPDSRRIAYAGYDRSVRLWDTDTGMPIGPPMSGHTDVVRSVAFSPDGGSVVSGGIDGQ
IWQWAITPAEWAATLCGKLTMNMSHRQWREWVSPDIDYVELCPGLPIPADDTPTGK
NT seq
2871 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgctcaggctgcgcaggttccgcggcagcagcaaactcgcggagaagaagagcgg
ttcgagtacgacgccttcatctcctacgcccacgatgatcggccggtcgccgccggcatc
cagaagggtctgcaccgcatcggccgtcgaatgggccagctgcatgcgttgcgggtattc
cgcgatgccaccgatttgatcgccagtcccgacctgtggggcagggtgaccgaggcgatg
ggccgcgcccggtacctgatcgtggtgctgtcgcctcattccgtcgcgtcgggctgggtg
aacaaggaggtcacccactggctcgaacggcatggaccggaccggctgttgttcgtcgtt
accggcggtcatctgacctgggacgaggcgtctggacggttcgacccggaccggtccgat
gtggccctgccggtcctgacgcagccggggattctcgccgccgagcccttctatgtcgac
gtcaccgaggacgcgccgtgggatcccgcgtcaccgatgttccgggagaagattaccgat
ctggccgctcccatccacggcaagccgaaatacgccctggccagtgaggatttacgcgaa
caacgacgcttccggcgcctacggcgagccgccatcaccggcctggtcttgttgactgtc
ctcgcggtcgccgcggcgacgctcgcattcgtgcaacggcaggagtcgatacgccagcgg
aaccaggcgattgccgtgcggctggtatcggaggcccagtccatgctcgccggcgcccga
cccggcggtgacgcacgcgcgttgaaacagatattggccgcgcagtcgatcggctccgaa
tcagaggatgccgccctgctcgacgcgatgctcgcacggaaggaactgctcgacatcgcc
gagaccacagcaacggacgtgaaggacattgcgctctcgccggacgagcggcgcatcgtc
accggcggggccgacggcaccgtacggctgtgggaagccgataccggcaagccgatagac
ccgcccatgaccggaaaccggggcgaggtggtcattgtgaggttcagtccggacgggcgg
cgcatcgcgtccggcggcgccaccacggttcgggtgtggaacgcggacaccggagcacca
ctcggcacaccgatgaccgtcgccctcggcgaggtgacgagcctggagttcagtccggac
ggcaggcggatcgtcactggctcgagtgaaatgacttcgagcggcttggtcaatcatggc
tcagttcaggtatggaacgcggacaccggagcacctcttggtgcaccgatgaccgagcat
gccggcatgattttgagcgtggcattcgccccggacggtcgccgccttgttgtcggttcc
ggcggacccgtccatggcgccgtacgagtgtgggatgcagacaccggtgcaccgctcggc
ttacctatgaccgagcatgacggcatggttttgagcgtggcattcgccccggacggccag
cgcatcgtctcaggtggtgccgacggcgccgtacggctgtggaatgccgacaccggagta
cccattggggagcccatgaccggacacgcgggtgcagtggcgagtgtggcattcgctccc
gacgggacacggatcgtctcagggggcgccgacggcaccgtacggctgtgggacgccgat
accggagcacccatcggggaacctctgacgggacacgaaagttgggtcttgtctgtgaca
ttcaaccccgacggccaacgggtcatctctggcggcggcggcgaaggcacggtacgggtg
tgggatatcgaaatcggttcggccggccaaggcagtgttctaagcgtggcgttcgccccg
gacgggcggcgtttcgtttccgggggctctgacggcaccctgcagctgtgggacccggat
atcagtgcgccgatcggcgaaccgatatccggacaaggcgtggtgacgagcgtggcgttc
gccccggacggacggcgcatcgtctcgggcagttccgccccagcggccaacggcacggct
gcacagtcaggcaccgtgcaactgtgggacgcggacacccgccaacccatcggcgagccg
atgatcggacaccagaactttgtttccagtgtggcgttcgccccggatgggcggcgcata
gcctccggcggtatcgacggcaccatccgactgtgggacgccgacacccgccaacccatc
ggcgaaccgatgaccggacaccaggatgcagtggtgagcgtggcgttcgccccagacggg
cggcaaatcgcctccagcggcagcgacggcaccatccgactgtgggacgccgacacccgc
caacccatcggcgaaccgatgacaggacaccatggtgaggtcacgagcgtggcattcgcc
ccggacggggagcggatcgcctccagcggtatcgacagcaccatccggctgtgggatccc
gaaactcgtcaaccggtcggcgaacctctgaacggacaggcgggtccgcttgcgagcgtg
gcctttgctccggacagccgccgcatcgcctacgccggttacgaccgctcggtacggcta
tgggatacggacacgggcatgccgatcggcccgccgatgagcggacatacggacgtggtg
cgcagtgtggcattcagcccggacggcgggtcggtcgtctccggcggcatcgacggccag
atctggcaatgggcaattacaccggcagagtgggcagccactttatgcggcaagctcacg
atgaatatgagccaccggcagtggcgcgaatgggtttcccccgacatcgactatgtcgaa
ctctgccccggacttccgattcccgccgacgacacccccaccgggaagtga
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