Rhodococcus sp. ZPP: HYG77_22540
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Entry
HYG77_22540 CDS
T11458
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
rhzp Rhodococcus sp. ZPP
Pathway
rhzp00521
Streptomycin biosynthesis
rhzp00523
Polyketide sugar unit biosynthesis
rhzp00525
Acarbose and validamycin biosynthesis
rhzp00541
Biosynthesis of various nucleotide sugars
rhzp01055
Biosynthesis of vancomycin group antibiotics
rhzp01100
Metabolic pathways
rhzp01110
Biosynthesis of secondary metabolites
rhzp01250
Biosynthesis of nucleotide sugars
Module
rhzp_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
rhzp00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
HYG77_22540 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
HYG77_22540 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
HYG77_22540 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
HYG77_22540 (rfbB)
00525 Acarbose and validamycin biosynthesis
HYG77_22540 (rfbB)
Enzymes [BR:
rhzp01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
HYG77_22540 (rfbB)
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Ortholog
Paralog
GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
3Beta_HSD
NAD_binding_4
RmlD_sub_bind
Polysacc_synt_2
Sacchrp_dh_NADP
NAD_binding_10
adh_short
NmrA
Rv0313_N
DUF6432
Motif
Other DBs
NCBI-ProteinID:
QTJ68078
LinkDB
All DBs
Position
4851657..4852652
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AA seq
331 aa
AA seq
DB search
MRIVVTGGAGFIGSNFVTATVRDRPDVEVTVLDALTYAGSRKSLSAVEDRIRFVQGDIAN
AALADQLVANSDMVVNFAAESHNDNSLVDPWPFVQTNIVGTYTLLQSVRRHGVRYHHVST
DEVYGDLELDDPKKFTEQTPYNPSSPYSSTKAASDMLVRAWIRSFGVQATLSNCSNNYGP
RQHIEKFIPRQITNILTGVRPKLYGGGTNVRDWIHVDDHNAAVWRIIESGQIGRTYLIGA
NGELDNLSVIRIILELMGRDPEDFDYVADRVGHDLRYAIDSSSLSGELGWYPRYTNFREG
LQATIDWYHNNRGWWENEKDAVEARYQAQGA
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgcggattgtcgttaccggtggtgccggtttcatcggatcgaattttgtcactgcaacc
gttcgcgatcgcccggatgtggaggtcactgtccttgacgcgctcacctacgcagggtcg
cgaaagtcgctctccgccgtggaggatcgtatccgcttcgtccagggagacattgccaac
gcagctcttgcagaccagctcgtcgctaactcggatatggtcgtgaacttcgctgccgaa
tcccacaacgacaattcgcttgttgacccttggccgttcgtccaaacgaacattgtcggt
acgtacacactcctccagtcagtgcgtcgacacggtgttcgttaccatcacgtatcgacg
gacgaggtatacggagacctcgagttggacgatcctaaaaagttcactgaacagacgccg
tacaacccttcgagcccgtactcgtccacgaaagccgcctcggacatgctcgtgcgtgcg
tggatccgatcgttcggtgttcaagcgacattgtcgaactgctctaacaactatggaccg
cgtcaacacattgagaagttcattccccggcagatcaccaacattctcactggcgtgcgc
ccgaagctgtatggcggtggaacgaacgtccgcgactggatacacgtcgacgaccacaac
gcggcagtttggcggatcatcgaatcgggtcagatcgggcggacctatcttatcggtgcc
aacggtgagctcgacaacctgtctgtcattcgcataatcctagaattgatgggcagagac
ccagaagacttcgattatgtggctgaccgagtcggtcacgacctgcgatacgccatcgac
tcgtcctcccttagtggcgaacttggctggtacccgcgctatacgaacttccgcgagggg
cttcaagcgaccatcgactggtaccacaacaaccgtggatggtgggagaacgaaaaggac
gctgttgaggcgcgctaccaagcacagggggcatga
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