Rhodococcus sp. ZPP: HYG77_26070
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Entry
HYG77_26070 CDS
T11458
Name
(GenBank) uracil-DNA glycosylase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
rhzp Rhodococcus sp. ZPP
Pathway
rhzp03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rhzp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HYG77_26070
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhzp03400
]
HYG77_26070
Enzymes [BR:
rhzp01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
HYG77_26070
DNA repair and recombination proteins [BR:
rhzp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
HYG77_26070
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
QTJ68672
LinkDB
All DBs
Position
complement(5660991..5661704)
Genome browser
AA seq
237 aa
AA seq
DB search
MGAPLNDLARLDAELVDCRACPRLVEWRERVALEKRAAYRNETYWGRPVPGFGPPDAAML
IVGLAPAAHGGNRTGRMFTGDRSGDFLYAALHAVGLASQPTATHIGDGLELFGTRVTAPV
HCAPPDNKPTPVERQTCRRWLDAELRILQPGLRSVIVLGGFGWQALLPVLGDAGWVVPRP
RPKFGHGAHVELAGRTGPLHLFGCYHVSQQNTFTGRLTPAMLESVLSDAARAAGLMG
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
gtgggcgcgccgctgaacgatcttgcgcgcctcgacgccgaactcgtcgactgccgcgcc
tgccctcgtctggtggagtggcgagagagggtggccctcgagaagcgcgccgcctaccgt
aacgaaacatactggggccgaccggttccgggattcggaccacccgatgcggccatgctg
atcgtcggactcgctcctgccgcacacggcggaaaccggacggggcggatgttcaccggt
gatcgcagcggcgacttcctgtacgcggcgctgcatgccgtcggtctggcaagtcagccg
accgccacgcacatcggtgacggcctcgaactgttcggcaccagggtcacggcacccgtg
cactgcgcgccgcccgacaacaaacccacgcctgtggaacggcagacctgccgtcgttgg
ctcgacgccgaattgagaatcctgcagcctgggctgcgctcggtgatcgtgctcggcgga
ttcggctggcaggcactgctgcccgtgctgggggacgccggatgggtcgtcccgcgaccc
cgcccgaagttcggccacggcgcccacgtcgaactcgccggccggaccggtcctctgcac
ctgttcgggtgttaccacgtcagccagcagaacaccttcaccggccggctcacccccgcg
atgctcgagtcggtgctgtccgacgccgcacgcgcggccgggttgatggggtga
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