Rhodococcus sp. ZPP: HYG77_26500
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Entry
HYG77_26500 CDS
T11458
Name
(GenBank) TM0106 family RecB-like putative nuclease
Organism
rhzp Rhodococcus sp. ZPP
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GFIT
Motif
Pfam:
AAA_12
RNase_H_2
AAA_30
AAA_11
AAA_19
ResIII
PDDEXK_1
AAA_16
Viral_helicase1
Cas_Cas4
AAA_22
nSTAND_NTPase5
NAT10_TcmA_helicase
nSTAND3
DEAD
SLFN-g3_helicase
Motif
Other DBs
NCBI-ProteinID:
QTJ68743
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Position
complement(5754212..5757694)
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AA seq
1160 aa
AA seq
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MFLLDDTIVYSASDLAAAATCEFALLRRLDATLGFAAAGAACSPSDDPMLRRTSSLGDAH
EHRRLAQFRAVFGDGVVTIDRPDYTALGLFEANSATVEAIRAGADVVYQGTFFDGRFLGF
CDFLVRNGDTYAVYDTKLSRHAKVSALLQLAAYAEALQRNGIPTSPEVHLLLGDDSDSSH
SLGDIAPVYSARRSALERVLDEHRDEQSLTEWGDPRYTACGRCDTCGPEVEGHRDLLLVA
GMRSTQRSRLIAGGIDTIDALAAHTGNVDGLAERSLDSLRAQAALQLRQESSGTPEFEVY
SPGALGGLPAPDDGDIFFDFEGDPLWAEDGSSDWGLEYLFGVVEGPPPGEKSAAPVFRPF
WAHSRAEERQALVDFLDYVMERRARYPDMHIYHYAAYEKSALLRLAGRHGVGEECVDNLL
RDNVLVDLYPVVRSALRIGERSYSIKKLEPLYMPEQPRDGDVTNAAASVVAYADYCDHRD
NGRLGEARDLLQGIADYNEYDCDSTLRLRNWLLTQAEKHGVALRPPGAASSPAADESSPT
ESALRQFAGSGTGDTRGHDQQAAALMAAAVGYHRRERKPFWWAHFDRLVVPTDELSDIRD
VLVVATAAVEETWHKSTPRQRKLRRRLSLTGRFGTGSTVGPKTTMYALYDTPAPEAVAGD
NPQQRGTSTVNVLEVAKDERRRDVVTVEELLGGEEYAELPVAVTPGPPITTDRIESAIAS
AADTMCEVLPDLPLCASADILRRFDPRTRSGRALPSVQGTDYAAAITAALLDLDNSYVAV
QGPPGTGKTYTGARVIKTLVEQHHWRVGVVAQSHSVIENMLGGIVKAGVPAELVAKKDGR
HRAATWTDIGSNDYPGFIAEAETTGCVIGGTAWDFANTDRVPPGSLDLLVIDEAGQFALA
NTIAVGGAARNLLLLGDPQQLPQVSQGTHPEPVDTSALGWLAEGHGALPPSRGYFLERTW
RMHPQLCARVSVLSYDGKLRSQETASTARRLDGMEPGVHTVVVDHQGNATQSPEESREVV
NRITKLLGAGWTDPSEFDGTRPLGESDILVVAPYNAQVALIERDLAAVGLDKVEVGTVDK
FQGREAAVAIVSMTASAIEDVPRGMSFLLSRNRMNVAVSRGKWAAVIVRSESLTRYMPST
PEGLTELGAFMRLCTDQPKH
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
gtgttcctcctcgacgacacgatcgtctacagcgcgagtgatctcgccgcggctgccacg
tgcgagttcgccttgctgcgtcgactggacgccaccctcgggttcgcggcggccggcgcg
gcctgctccccttccgacgaccccatgctgcggcgcacctccagcctcggtgacgcacac
gaacaccgcaggctcgcgcagttccgcgctgtcttcggcgacggagtggtcacgatcgat
cgccccgactacaccgcgctcggcttgttcgaggccaattccgctaccgtcgaggcgatc
cgggccggtgccgacgtcgtgtaccagggaacattcttcgacggccgcttcctcggtttc
tgcgactttctcgtccgcaacggcgacacgtacgccgtctacgacaccaagctttcccga
cacgccaaggtgtcagccctcctgcaactcgccgcgtacgcggaagctctgcagcgcaac
ggcattcccacctccccggaggtgcacctgctgctgggcgacgacagcgactcgtcgcac
tccctcggtgacatcgcgccggtgtattccgcccgccggtccgccctcgaacgggtactc
gacgaacaccgcgacgagcagtcgctcaccgagtggggcgatccccggtacacggcgtgc
ggccggtgcgacacctgcgggccggaggtagaggggcaccgcgacctcctgctcgtggcc
gggatgcgttcgacgcagcggagtcggctgatcgcgggcggtatcgacaccatcgatgcg
cttgcagcgcacaccggtaacgtcgacggtctcgccgagcgcagtctcgactcgctccgc
gcccaggccgcgctgcagctacggcaggagtcgtcgggaacacccgaattcgaggtgtac
tcgcccggcgcactcggcgggttgcccgcaccggacgacggggacattttcttcgacttc
gagggagacccgctgtgggccgaggacggctcgtccgactggggtctcgagtaccttttc
ggtgtcgtcgaggggccgccgccgggcgagaagtctgccgccccggtgttccggcccttc
tgggcacacagccgcgccgaagagcgtcaggccctcgtcgacttcctcgactacgtcatg
gaacgccgcgcccgctaccccgacatgcacatctaccactacgccgcgtacgagaagtcg
gcgctgctacggctggcggggcgccacggagtcggtgaggagtgcgtcgacaatctgttg
cgcgacaacgttctcgtcgacctgtatcccgtggtccgctcagccctgcgcatcggcgaa
cgttcctacagcatcaagaaactcgaaccgctgtacatgcccgagcagccgcgcgacgga
gacgtcaccaatgccgcagcgtccgtggtcgcctacgccgattattgcgatcaccgtgac
aacggccgcctcggcgaggcccgcgacctgttgcaaggcatcgccgactacaacgagtac
gactgcgattccaccctgagattgcggaactggttgctgacacaggccgagaagcatggt
gtcgctctccgtccgccgggcgcggcatcctctcctgccgcggacgagtcctcgcccacg
gaatcggctctacgacagttcgccggctccggaaccggcgacacccgcgggcacgatcag
caggcggccgccctcatggcggccgcggtcggatatcaccgccgggagcggaagcccttc
tggtgggctcacttcgaccgtctcgtcgtccctaccgacgagttgtcggacatccgggac
gttctggtggtcgcgacggccgccgtcgaggagacctggcacaagagcacaccgcggcaa
cgcaagcttcggcggcgcctgtcactcaccggacgcttcggaacgggcagcaccgtcggc
cccaagaccacgatgtacgcgctgtacgacactcccgcacccgaggcggtcgcgggtgac
aaccctcagcagagggggacgtccaccgtcaacgtgctcgaggtcgccaaggacgagcgt
cgccgcgacgtcgtgacggtcgaggagcttctcggcggcgaggagtatgccgagctgccg
gtggccgtcacccccggtccgccgatcacgacggaccgcatcgaatcggctatcgcgtcc
gcagccgacacaatgtgcgaggtcctgcccgaccttcccctgtgcgcgtcggcagacatc
ctgcggcgcttcgaccctcggacccggagcggacgagcgcttccatcggttcaaggcacc
gactacgcggcggcaatcaccgccgccctcctcgacctcgacaattcctacgtcgccgtt
caggggccgcccggcaccggcaagacctacaccggcgcccgcgtgatcaagactctcgtc
gagcaacaccactggcgggtgggggttgtggcgcagtcacattcggtcatcgagaacatg
ctcggcggtatcgtcaaagccggcgtgcccgcggagttggtggcgaaaaaggacggacgg
caccgcgctgcaacgtggacggacatcggctcgaacgactatcccggattcatcgccgag
gcggagaccaccggatgcgtgatcggcggtacggcctgggatttcgcgaataccgatcgg
gtgccacccggaagtctcgatcttctggtgatcgacgaggccggacagttcgcgctggcc
aacaccatcgcggtcggcggcgctgcccgcaacctcctgcttctcggtgacccgcagcag
cttccgcaggtcagtcaaggcactcatcccgaacccgtggacacctccgcgctgggctgg
ctcgccgaggggcacggtgcgctgcccccgagccggggctacttcctcgaacgcacctgg
cggatgcacccgcagctgtgcgcacgggtgtcggtgctgtcgtatgacgggaagcttcgg
tctcaggaaacggcaagtaccgcgcgaagactcgacggcatggaaccgggagtgcacact
gtcgtcgtcgatcatcagggcaatgccacccaatcacccgaggaatcgcgcgaagtggtc
aatcggatcaccaagctgctcggggccgggtggaccgaccccagcgagttcgacggcacg
cgcccactgggcgaatccgacattttggtggtggcgccgtacaacgcccaggtggcgctc
atcgagcgggatctcgcagcggtcggactcgacaaggtagaggtgggaacggtcgacaag
ttccagggacgcgaggcggccgtcgccatcgtgtcgatgacggcgtccgcgatcgaggat
gtgccccgcggtatgtcgttcctgctgtcccgtaaccggatgaatgtggccgtctcccgc
ggcaagtgggctgccgtcatcgtccgatcggaatccctgacgcggtacatgccgagcaca
ccggaagggttgaccgaactcggcgccttcatgcgcctgtgcacggatcaaccgaagcac
tga
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