Rhodococcus sp. ZPP: HYG77_27295
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Entry
HYG77_27295 CDS
T11458
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
rhzp Rhodococcus sp. ZPP
Pathway
rhzp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rhzp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HYG77_27295 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rhzp03019
]
HYG77_27295 (groL)
03110 Chaperones and folding catalysts [BR:
rhzp03110
]
HYG77_27295 (groL)
03029 Mitochondrial biogenesis [BR:
rhzp03029
]
HYG77_27295 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rhzp04147
]
HYG77_27295 (groL)
Enzymes [BR:
rhzp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
HYG77_27295 (groL)
Messenger RNA biogenesis [BR:
rhzp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
HYG77_27295 (groL)
Chaperones and folding catalysts [BR:
rhzp03110
]
Heat shock proteins
HSP60 / Chaperonin
HYG77_27295 (groL)
Mitochondrial biogenesis [BR:
rhzp03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
HYG77_27295 (groL)
Exosome [BR:
rhzp04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
HYG77_27295 (groL)
Exosomal proteins of other body fluids (saliva and urine)
HYG77_27295 (groL)
Exosomal proteins of breast cancer cells
HYG77_27295 (groL)
Exosomal proteins of colorectal cancer cells
HYG77_27295 (groL)
Exosomal proteins of bladder cancer cells
HYG77_27295 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
QTJ68887
LinkDB
All DBs
Position
5954057..5955667
Genome browser
AA seq
536 aa
AA seq
DB search
MSKQIEFNETARRSLERGVDKLADAVKVTLGPRGRHVVLAKAFGGPTVTNDGVSIAREID
LEDPFENLGAQLVKSVATKTNDVAGDGTTTATVLAQAIVRGGLKNIAAGANPMALGVGIN
AAAEKVVEALLAAATPVEGKKSIAQVATVSSRDEEIGELVGEALTRVGTDGVVTVEESSS
LATELVITEGVQFDKGYLSPYFVTDLDAQKAVYEDALVLLYREKISSLPDFLPLLEKVAE
SGKPLLIIAEDVEGEVLSTLVVNSIRKTIKAVAVKAPFFGDRRKAFLDDLAIVTGGTVIN
SEVGLSLKEAGLDLLGSARRVVVSKDETTIVDGAGTDADIKGRVAQLRREIENTDSDWDR
EKLEERLAKLAGGVAVIKVGAATETDLKERKFRVEDAVNAAKAAVAEGIVPGGGSALVQA
STELVDNLGLTGDEATGVKVVREALQAPLFWIASNAGLDGSVVTSKVAEQPKGHGFNAAT
LTYGDLLADGVVDPVKVTRSAVVNAASVARMILTTESAVVEKPEEEQEQTGHGHSH
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagcagattgagttcaacgagaccgcacgccggtctctcgagcgcggggtcgac
aagctggccgacgcggtcaaggtgaccttgggtccgcgtggccgccacgtagtactggcg
aaggccttcggcggccccaccgtcaccaacgacggcgtcagcatcgcgcgggagatcgac
ctcgaggatcccttcgagaacctcggcgcgcagctggtcaagagcgtcgccaccaaaacc
aatgacgtcgcgggtgacggcaccaccaccgccaccgtgctggctcaggccatcgttcgc
ggcggtctgaagaacattgcggcaggcgccaacccgatggcactcggagtcggcatcaac
gccgccgccgagaaggtcgtcgaggcgctgctcgcggccgccaccccggtcgagggcaag
aagtccatcgcccaggtcgccacggtttcctcgcgtgacgaagagatcggcgaactggtc
ggcgaggcgctcactcgcgtgggcacggacggtgtcgtgacggtggaggaatcctccagc
ctcgcaaccgagctcgtgatcaccgaaggcgtccagttcgacaagggttacctgtcgccg
tatttcgtgaccgatctcgacgcgcagaaggccgtgtacgaggacgccctcgtgctgctc
taccgcgagaagatcagctcacttcccgacttcctgccgttgctggagaaggttgccgag
agcggcaagccgcttctcatcatcgccgaggacgtcgagggcgaggttctctcgacgctg
gtggtcaactccatccggaagacgatcaaggccgtcgcggtgaaggcgccgttcttcggt
gaccgtcgcaaggcgttcctcgacgacctcgccatcgtcaccggcggtacggtcatcaac
tccgaggtcgggctgagcctcaaggaggccggactggacctcctcggcagtgcccgtcgc
gtcgtggtcagcaaggacgagaccacgatcgtcgacggcgccggcaccgacgccgacatc
aagggccgcgtcgcgcagctgcgccgggagatcgagaacaccgactccgactgggatcgc
gagaagctcgaagagcgtctggcgaagctggccggcggtgtcgcggtcatcaaggtgggt
gccgcaaccgagacggacctcaaggaacgcaagttccgcgtcgaggatgccgtcaacgcc
gccaaggctgctgtcgccgagggcatcgttcccggtggcggatcggccctcgtgcaggcg
agcaccgagctggtcgacaacctcggtctgaccggtgacgaggccacgggcgtcaaggtc
gtgcgcgaagcgctgcaggcgcccctgttctggatcgccagcaatgccggtctcgacggt
tccgtcgtcaccagcaaggtcgccgaacagcccaaggggcacggcttcaacgccgcgacc
ctcacctacggtgacctgctcgcagacggtgtcgtcgaccccgtcaaggtcacccgctcc
gctgtcgtgaacgcggcatcggtggcacggatgatcctgacgaccgaaagcgctgtggtc
gagaagcccgaagaagagcaggagcagaccggtcacggacacagccactga
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