Rhodococcus sp. ZPP: HYG77_29395
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Entry
HYG77_29395 CDS
T11458
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
rhzp Rhodococcus sp. ZPP
Pathway
rhzp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rhzp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HYG77_29395
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rhzp03019
]
HYG77_29395
03016 Transfer RNA biogenesis [BR:
rhzp03016
]
HYG77_29395
Enzymes [BR:
rhzp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
HYG77_29395
Messenger RNA biogenesis [BR:
rhzp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
HYG77_29395
Transfer RNA biogenesis [BR:
rhzp03016
]
Prokaryotic type
tRNA degradation factors
HYG77_29395
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
KH_1
RNase_PH_C
KH-I_KHDC4-BBP
KH_PNO1_2nd
KH_2
S1_RRP5
KH_KhpA-B
KH_NusA_1st
Motif
Other DBs
NCBI-ProteinID:
QTJ69245
LinkDB
All DBs
Position
6387267..6389540
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AA seq
757 aa
AA seq
DB search
MTENSAVEIDEGVFESTAVIDNGSFGTRTIRFETGRLAQQAAGAVVAYLDDETMLLSATS
ASKHPKEHFDFFPLTVDVEERMYAAGRIPGSFFRREGRPSTDAILTCRLIDRPLRPSFVD
GLRNEIQVVVTVMSLNPQDLYDVVAINAASASTQIAGLPFSGPVGGVRVALITSAENKAG
QWVAFPTVEQLENAVFDMVVAGRIVSGSGDDADVAIMMVEAEATDNVISLIADGAQAPTE
AIVAEGLEAAKPFIARLCTAQQQLAAKASKPTGEFPVFPAYQDDVFAAVEEAAAEKLSAA
LTIAGKQERDDKTDEVKVEVLEQVAPKFEGREKELGAAFRSLTKKLVRQRILRDQFRIDG
RGITDIRSLSAEVALVPRAHGSALFERGETQILGVTTLDMVKMAQQVDSLGPETTKRYMH
HYNFPPYSTGETGRVGSPKRREIGHGALAERALMPVLPSVEEFPYAIRQVSEALSSNGST
SMGSVCASTLALLNAGVPLKAPVAGIAMGLVSDQVDGETRYVALTDILGAEDAFGDMDFK
VAGTKDFVTALQLDTKLDGIPSKVLAGALSQAKDARATILDVMAEAIDTPDEMSPFAPRV
TAIKVPVDKIGEVIGPKGKMINSITEQTGANISIEDDGTVFVGATDGPSAQAAIDMINAI
ANPQLPKVGERFLGTVVKTTAFGAFVSLLPGRDGLVHISKLGSGKRIAKVEDVVSVGSKL
RVEIADIDNRGKISLIPVEEDGAAPATEQDEEQAAEK
NT seq
2274 nt
NT seq
+upstream
nt +downstream
nt
atgacagagaactccgcagtagagatcgatgagggcgtgttcgaatccaccgccgtgatc
gacaacgggtccttcggcacccgcaccattcgattcgagaccggccgcctcgctcagcag
gccgccggcgccgtcgtcgcctacctcgacgacgagaccatgttgctgtcggccaccagc
gccagcaagcaccccaaagagcacttcgacttcttccccctgacggtggacgtcgaggag
cggatgtacgcggccggtcgcattcccggctcgttcttccgccgtgagggccggccctcc
acggacgccatcctcacctgccgcctgatcgaccgtccgctgcgcccgtcgttcgtcgac
ggcctgcgtaacgagatccaggtcgtcgtcacggtgatgagcctcaacccgcaggacctc
tacgacgtggtcgccatcaacgcggcgtcggcgtccacccagatcgccggcctgccgttc
tccggtcctgtcggtggtgtgcgtgtagcgctcatcacctcggctgagaacaaggccggc
cagtgggtggcattcccgacggtcgagcagctcgagaacgcagtcttcgacatggtcgtt
gccggccgcatcgtctccggttccggtgacgacgccgatgtcgcgatcatgatggtcgag
gcggaggccaccgacaacgtgatctccctgatcgcggacggcgctcaggcaccgaccgag
gcgatcgtggccgagggcctcgaggcggccaagccgttcatcgcgcggctgtgcaccgct
cagcagcagctcgcggcgaaggcgtcgaagcccaccggcgagttccccgtcttcccggcc
taccaggacgacgtgttcgccgcggtcgaagaggccgccgccgaaaagctgagtgccgca
ctcaccattgccggcaagcaggagcgcgacgacaagaccgacgaggtcaaggtcgaggtg
ctcgagcaggtcgcacccaagttcgagggacgcgagaaggaactcggcgcagcgttccgt
tcgctgaccaagaagctggtacgtcagcgcatcctgcgcgaccagttccgcatcgacggt
cgtggcatcacggacatccgttcgctctccgccgaggtcgccctcgtgccgcgggcacac
ggttccgcgctgttcgagcgtggcgaaacccagatcctgggcgtcaccaccctcgacatg
gtgaagatggcgcagcaggtcgacagcctcggtcccgagaccaccaagcggtacatgcac
cactacaacttcccgccgtactccaccggagagaccggtcgtgtcggttcgccgaagcgc
cgcgagatcggacacggtgcgctggccgagcgggcactcatgcctgtactgccgagcgtc
gaggagttcccctacgccatccgccaggtgtcggaggctctcagctcgaacggttccacc
tcgatgggttcggtgtgtgcgtcgacgctcgcgctgctcaacgccggtgtgccgctgaag
gctccggttgccggtatcgccatgggtctggtgtccgaccaggtcgacggggagacccgc
tacgtggccctcaccgacatcctcggtgccgaagacgctttcggtgacatggacttcaag
gtcgcgggcaccaaggacttcgtgacggccctccagctcgacacgaagctcgacggcatc
ccgtcgaaggttctcgccggcgcgttgtcgcaggccaaggatgcgcgtgcgacgatcctc
gacgtcatggccgaggccatcgacactccggacgaaatgagcccgttcgctccgcgcgtg
acggccatcaaggtgcccgtcgacaagatcggcgaggtcatcggccccaagggcaagatg
atcaactcgatcaccgagcagaccggcgccaacatctccatcgaagatgacggcaccgtg
ttcgtcggtgcgacggacggcccgtccgcgcaggccgcgatcgacatgatcaacgccatc
gccaacccgcagctgccgaaggtcggcgagcgcttcctgggcacggtcgtcaagaccacc
gccttcggtgcgttcgtgtcgctcctccccggccgcgacgggctggtgcacatctcgaag
ctgggctccggcaagcgcattgccaaggtcgaggacgtcgtgagcgtcggctccaagttg
agggtcgagatcgccgacatcgacaaccgcggcaagatctcgctgatcccggtcgaggag
gacggcgctgcgccggccaccgagcaggacgaagagcaggcagccgagaagtag
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