Rhodococcus sp. ZPP: HYG77_29460
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Entry
HYG77_29460 CDS
T11458
Name
(GenBank) ribonuclease J
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
rhzp Rhodococcus sp. ZPP
Pathway
rhzp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rhzp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HYG77_29460
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rhzp03019
]
HYG77_29460
Messenger RNA biogenesis [BR:
rhzp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
HYG77_29460
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GFIT
Other DBs
NCBI-ProteinID:
QTJ70053
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Position
6399828..6401480
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AA seq
550 aa
AA seq
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MRVVALGGIGEIGRNMTVFEHQGKLLIVDCGVLFPEDQQPGVDLILPDFRHIEDRMADVE
AVVLTHGHEDHIGAIPFLLRLRPDLPVIGSRFTLALVAAKCREHRQRPNLVEVTEGQRTA
HGPFECEYFAVNHSIPDAIAVAIRTDAGVVLHTGDIKLDQLPLDGRLTDLAGFSRLGDEG
VDLFLVDSTNAEVPGFVTPEREIGGVLDNVIGKAKQRVIVASFASHVHRIQQVVDVAHRY
NRRVAFVGRSMVRNMQIAQDLGYLSVPDGLVVDIDTAANLPDDRLVLISTGSQGEPLSAL
SRMARGEHRQINVRANDLVVLASSLIPGNENSVFAVVNGLAKRGATVVTQQSAKVHVSGH
ASAGELLYLYNAVRPTNAMPVHGEWRHLRANAALAKATGVPEERIVLAEDGVVVDMVDGL
AEIVGQVPVGHVYVDGLSVGDVGDSTLSDRLVLGEGGFIAINVVIDDHTGRAVSTPEVSG
RGFSDDPTALKDAAQLVEAELARLATEGINDAHRIAQAIRRVVGKWVADKYRRRPMIVPT
VIAVPSFDGK
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
ctgcgagtggtcgccctcgggggcatcggtgaaatcggccggaacatgacggtcttcgag
caccagggaaaactgctcatcgtcgactgcggcgtgctgtttcccgaggatcagcagcct
ggtgtcgatctgatcctgccggacttccggcacatcgaggatcgcatggccgatgtcgag
gccgtcgtcctcacccacggtcacgaggatcacatcggcgcgatcccgttcctgctccgc
ctgcggccggatctgccggtcatcggctcccggttcacgctcgcgctcgtcgcagccaaa
tgccgggaacatcgtcagcgacccaacctcgtcgaggtgacggaaggccagcgcacggca
cacggcccgttcgagtgtgagtacttcgcggtcaaccactccatcccggacgcgatcgcg
gtcgccatcaggaccgacgccggagtcgtgctgcacaccggtgacatcaaactcgaccag
cttccgctcgacggcaggctcaccgacctcgccggcttctcgcgtctcggcgacgaaggc
gtggacctgttcctggtcgactcgaccaacgccgaggtgccgggattcgtcacaccggaa
cgtgagatcggcggcgtgctcgacaacgtcatcggtaaggcgaagcaacgtgtgatcgtg
gcgtcgttcgccagccacgtccaccgcatccagcaggtcgtcgacgtggcgcaccgctac
aaccgccgggttgcgttcgtgggccggtccatggtccgcaacatgcagatcgcacaggat
ctcggctacctgagcgtgcccgacggtctggtggtcgacatcgacaccgcggcgaacctg
cccgacgatcgcctcgttctcatctcgaccggctctcagggtgaaccgctgtcggcgttg
tcgcggatggcgcggggtgaacaccggcagatcaatgtccgggccaacgacctggtggtc
ctcgcctcgtcattgattccgggtaacgagaactctgtcttcgcggtggtgaacggtctc
gccaagcgcggcgccaccgtggtcacgcagcagagcgccaaggtgcacgtctccggtcac
gcgtcggcgggtgaactgctctacctgtacaacgcggtccggcccaccaacgccatgccg
gtgcacggcgaatggcggcacctgcgcgccaacgccgcgctggccaaggccaccggcgtt
ccggaagaacgcatcgtgctcgccgaggacggcgtagtggtcgacatggtggacggtctc
gccgaaatcgtcgggcaggtgccggtcggacacgtctacgtcgacggactgtccgtcggt
gatgtcggcgactccacgctgtcggatcgattggttctcggggagggcgggttcattgcg
atcaacgtggtgatcgacgaccacaccggccgcgccgtcagcaccccggaggtgtccggg
cgcggattctccgacgacccgaccgccctcaaggacgccgcccagctggtcgaggcggaa
ctcgcgcgcctggccacggagggcatcaacgacgcgcatcggattgcccaggcgatccgg
cgggtagtgggcaagtgggttgcggacaagtaccgccgccggccgatgatcgtgcccacc
gtgatcgcggtgccgtcgttcgacggcaagtag
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