KEGG   Rhodococcus sp. ZPP: HYG77_29460
Entry
HYG77_29460       CDS       T11458                                 
Name
(GenBank) ribonuclease J
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
rhzp  Rhodococcus sp. ZPP
Pathway
rhzp03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:rhzp00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    HYG77_29460
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rhzp03019]
    HYG77_29460
Messenger RNA biogenesis [BR:rhzp03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     HYG77_29460
SSDB
Other DBs
NCBI-ProteinID: QTJ70053
LinkDB
Position
6399828..6401480
AA seq 550 aa
MRVVALGGIGEIGRNMTVFEHQGKLLIVDCGVLFPEDQQPGVDLILPDFRHIEDRMADVE
AVVLTHGHEDHIGAIPFLLRLRPDLPVIGSRFTLALVAAKCREHRQRPNLVEVTEGQRTA
HGPFECEYFAVNHSIPDAIAVAIRTDAGVVLHTGDIKLDQLPLDGRLTDLAGFSRLGDEG
VDLFLVDSTNAEVPGFVTPEREIGGVLDNVIGKAKQRVIVASFASHVHRIQQVVDVAHRY
NRRVAFVGRSMVRNMQIAQDLGYLSVPDGLVVDIDTAANLPDDRLVLISTGSQGEPLSAL
SRMARGEHRQINVRANDLVVLASSLIPGNENSVFAVVNGLAKRGATVVTQQSAKVHVSGH
ASAGELLYLYNAVRPTNAMPVHGEWRHLRANAALAKATGVPEERIVLAEDGVVVDMVDGL
AEIVGQVPVGHVYVDGLSVGDVGDSTLSDRLVLGEGGFIAINVVIDDHTGRAVSTPEVSG
RGFSDDPTALKDAAQLVEAELARLATEGINDAHRIAQAIRRVVGKWVADKYRRRPMIVPT
VIAVPSFDGK
NT seq 1653 nt   +upstreamnt  +downstreamnt
ctgcgagtggtcgccctcgggggcatcggtgaaatcggccggaacatgacggtcttcgag
caccagggaaaactgctcatcgtcgactgcggcgtgctgtttcccgaggatcagcagcct
ggtgtcgatctgatcctgccggacttccggcacatcgaggatcgcatggccgatgtcgag
gccgtcgtcctcacccacggtcacgaggatcacatcggcgcgatcccgttcctgctccgc
ctgcggccggatctgccggtcatcggctcccggttcacgctcgcgctcgtcgcagccaaa
tgccgggaacatcgtcagcgacccaacctcgtcgaggtgacggaaggccagcgcacggca
cacggcccgttcgagtgtgagtacttcgcggtcaaccactccatcccggacgcgatcgcg
gtcgccatcaggaccgacgccggagtcgtgctgcacaccggtgacatcaaactcgaccag
cttccgctcgacggcaggctcaccgacctcgccggcttctcgcgtctcggcgacgaaggc
gtggacctgttcctggtcgactcgaccaacgccgaggtgccgggattcgtcacaccggaa
cgtgagatcggcggcgtgctcgacaacgtcatcggtaaggcgaagcaacgtgtgatcgtg
gcgtcgttcgccagccacgtccaccgcatccagcaggtcgtcgacgtggcgcaccgctac
aaccgccgggttgcgttcgtgggccggtccatggtccgcaacatgcagatcgcacaggat
ctcggctacctgagcgtgcccgacggtctggtggtcgacatcgacaccgcggcgaacctg
cccgacgatcgcctcgttctcatctcgaccggctctcagggtgaaccgctgtcggcgttg
tcgcggatggcgcggggtgaacaccggcagatcaatgtccgggccaacgacctggtggtc
ctcgcctcgtcattgattccgggtaacgagaactctgtcttcgcggtggtgaacggtctc
gccaagcgcggcgccaccgtggtcacgcagcagagcgccaaggtgcacgtctccggtcac
gcgtcggcgggtgaactgctctacctgtacaacgcggtccggcccaccaacgccatgccg
gtgcacggcgaatggcggcacctgcgcgccaacgccgcgctggccaaggccaccggcgtt
ccggaagaacgcatcgtgctcgccgaggacggcgtagtggtcgacatggtggacggtctc
gccgaaatcgtcgggcaggtgccggtcggacacgtctacgtcgacggactgtccgtcggt
gatgtcggcgactccacgctgtcggatcgattggttctcggggagggcgggttcattgcg
atcaacgtggtgatcgacgaccacaccggccgcgccgtcagcaccccggaggtgtccggg
cgcggattctccgacgacccgaccgccctcaaggacgccgcccagctggtcgaggcggaa
ctcgcgcgcctggccacggagggcatcaacgacgcgcatcggattgcccaggcgatccgg
cgggtagtgggcaagtgggttgcggacaagtaccgccgccggccgatgatcgtgcccacc
gtgatcgcggtgccgtcgttcgacggcaagtag

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