Rhodococcus sp. 21391: GO592_06875
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Entry
GO592_06875 CDS
T10971
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
rhzq Rhodococcus sp. 21391
Pathway
rhzq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rhzq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GO592_06875 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rhzq03021
]
GO592_06875 (rho)
03019 Messenger RNA biogenesis [BR:
rhzq03019
]
GO592_06875 (rho)
Transcription machinery [BR:
rhzq03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
GO592_06875 (rho)
Messenger RNA biogenesis [BR:
rhzq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
GO592_06875 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
Rho_N
AAA_25
NACHT
Spore_III_AA
Motif
Other DBs
NCBI-ProteinID:
QQZ15908
LinkDB
All DBs
Position
1457471..1459609
Genome browser
AA seq
712 aa
AA seq
DB search
MTDTDLIAAPVRASSVDTVGAQAGDSSQASSTAPDTGAVTASTKRAEARRGAGLSGMVLT
ELRTLAGELGIKGISGMRKGDLIAAIKERQGGSSAPAAAATEAAPRTRATRAKREQSAQT
ELEVTPQAETTEKTAEPKSAEPATGDGAAADSDTAEGGRRGRQRRGSARRAGAPEQGDQG
GNAQDTASANATDTQQAERKQADDRQDSAEKPAKQDGSGEQGGDRSRRERGGDRGDRGDT
RGDRGERGDRGERGDRGERGDRGERGDRGDRDNRGDRSQGSNGPRNNDNRPGDDEEGGRG
RRGRRFRERRRGRDRGEGGGGDARETEIREDDVLQPVAGILDVLDNYAFVRTSGYLAGPN
DVYVSMNLIRKNGLRRGDAITGAVRVGREGEQGNQRQKFNPLVRIDTVNGGDVEAAKKRP
EFGKLTPLYPNQRLRLETTPNILTTRVIDLVMPIGKGQRALIVSPPKAGKTSVLQAIANA
IATNNPECYLMVVLVDERPEEVTDMQRSVKGEVISSTFDRPPGDHTSVAELAIERAKRLV
EAGKDVVVLLDSITRLGRAYNNSSPASGRILSGGVDSTALYPPKRFLGAARNIENGGSLT
IIATAMVETGSTGDTVIFEEFKGTGNAELKLDRKIAERRVFPAVDVNPSGTRKDELLLSP
DEAAVLHKLRRVLSGLDSHQAIDLLIDRLKKSKSNIEFLMQVSKTAPGAIDD
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgatacggacctcatcgccgctcctgtgcgcgcctcctcggtggataccgttggc
gcgcaggcaggcgactcttcacaggcgtcatcgaccgcacccgacaccggtgccgtgaca
gcctccaccaagcgcgccgaggcgcgccggggtgccgggctgtccggaatggtgctcacc
gagctccgcactctcgcaggtgagctgggcatcaagggcatttcggggatgcgcaagggc
gacctgatcgccgcgatcaaggagcgtcagggcggctcttccgccccggccgctgccgcg
accgaagccgctccccggacccgggccacgcgcgcgaagcgcgaacagtccgctcagacc
gaactcgaagtgactccgcaggcggagaccacggagaagaccgccgagcccaagtcggcc
gaacccgcgacgggcgacggcgcagccgccgactccgacaccgccgaaggcggccgtcgc
gggcgtcagcgccgcggatccgcgcgtcgggcaggcgcacccgagcagggtgaccagggc
ggcaacgctcaggacaccgcctcggcgaatgccaccgacacgcagcaggccgagcgcaag
caggccgacgaccgtcaggattccgccgagaagccggccaagcaggacggctccggcgaa
cagggcggcgaccgcagccgacgtgagcggggcggcgaccgcggtgatcgtggcgacact
cgtggtgaccgcggcgaacgcggtgaccggggcgaacgcggtgaccggggcgaacgcggt
gaccggggcgaacgcggtgaccggggcgatcgcgacaaccgtggcgaccgcagccagggc
agcaacggcccgcgcaacaacgacaaccgcccgggcgacgacgaggaaggcggtcgcgga
cgccgcggacgtcgcttccgcgaacgtcgtcgtggacgcgaccgcggcgaaggcggcggc
ggtgacgcccgcgagaccgagatccgcgaggacgacgtcctgcagccggtcgccggcatc
ctggacgtcctcgacaactacgcgttcgtgcggacctccggctacctggccggaccgaac
gacgtctacgtgtcgatgaacctgatccgcaagaacggtctccgccgcggcgacgccatc
accggcgccgtccgggtcggacgcgaaggcgagcagggcaaccagcgccagaagttcaac
ccgctggtccgcatcgacaccgtcaacggtggcgacgtggaagcggcaaagaagcgcccc
gagttcggcaagctcaccccgctgtacccgaatcagcggctgcgtctggagacgacgccg
aacatcttgacgacccgtgtcatcgacctggtgatgccgatcggcaagggacagcgtgcg
ctgatcgtgagcccgccgaaggccggtaagaccagcgttctgcaggccatcgccaacgcc
atcgcgaccaacaaccccgagtgctacctcatggtcgtgctggtcgacgagcgtcccgaa
gaggtcaccgacatgcagcgttcggtgaagggcgaggtcatctcctcgaccttcgaccgt
ccgccgggagaccacacctcggtcgccgagctggccatcgagcgtgcgaagcgtctggtg
gaggcgggcaaggacgtcgtcgtcctcctcgactcgatcacccgcctcggccgtgcgtac
aacaactcgtcgccggcctcgggacgcatcctctccggtggtgtcgactcgaccgcgctg
tatccgccgaagcgtttcctcggtgctgcgcgcaacatcgagaacggcggttcgctcacg
atcatcgcgacggccatggtcgagaccggttccaccggcgacaccgtgatcttcgaggag
ttcaagggcaccggtaacgccgagctgaagctcgaccgcaagatcgcggaacgtcgtgtg
ttcccggccgtggacgtgaacccgtcgggaacgcgtaaggacgagctgctgctcagcccg
gacgaggcggcggtgctgcacaagctccggcgcgtgctctcgggtctcgactcgcaccag
gccatcgatctgctgatcgaccgcctcaagaagagcaagagcaacatcgaattcctcatg
caggtgtcgaagactgctccgggcgcgatcgacgactga
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