Rhodococcus sp. 21391: GO592_16300
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Entry
GO592_16300 CDS
T10971
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
rhzq Rhodococcus sp. 21391
Brite
KEGG Orthology (KO) [BR:
rhzq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rhzq03016
]
GO592_16300 (truB)
Enzymes [BR:
rhzq01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
GO592_16300 (truB)
Transfer RNA biogenesis [BR:
rhzq03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
GO592_16300 (truB)
Prokaryotic type
GO592_16300 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C
TruB_C_2
LPP
Motif
Other DBs
NCBI-ProteinID:
QQZ17516
LinkDB
All DBs
Position
complement(3501764..3502681)
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AA seq
305 aa
AA seq
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MSAREKPSSGLVGAGLLIVDKDAGVTSHDVVARCRKLLGTRKVGHAGTLDPMATGVLVLG
VERATKLLGLLALTTKAYTATIRLGQATTTDDAEGEVVASADASGVTDEEIAAQVHTLTG
DIQQIPSSVSAIKVDGRRAHALIRAGEEFELAARSVTVSRFEVVARRTEGTFVDLDVEVE
CSSGTYVRALARDLGIALIGVGGHLTSLRRTRVGPFTLEHARTLEQLAEEPGVSLDIDAA
AQTAFPHRQIDAAEAESISQGRWLEPIGIKGVYAAIDPSGHTIALLQERGRRASSVMVVR
PATLR
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
gtgtctgcacgtgaaaagccttcttccggtctcgtcggcgccggactgctcatcgtcgac
aaggacgcgggcgtcaccagccacgacgtggtggcccggtgccggaagctgctcggcacc
cggaaggtcgggcacgcgggcactctcgacccgatggccaccggggtgctggtgctcggg
gtggagcgggcgacgaagctgctggggctcctcgcgctgaccaccaaggcgtacacggcc
acgatccggctgggtcaggccaccaccaccgacgacgccgagggcgaggtcgtcgcgtcg
gccgatgcgtccggcgtgacggacgaggagatcgccgcgcaggtgcacaccctcaccgga
gacatccagcagatcccgtcgagcgtcagcgccatcaaggtcgacggccggcgggcgcac
gcactgatccgtgcgggcgaggagttcgaactcgctgcccggtcggtcacggtgtctcgg
ttcgaggtcgtcgcgaggcgaaccgagggcacgttcgtcgacctcgacgtcgaggtggag
tgttcctccggcacctatgtccgggcgctcgcgcgtgatctggggatcgcgctgatcggc
gtcggcgggcatctcacctcgctgcgacggacccgggtgggaccgttcacgctcgagcac
gcgcgcacgctggagcagcttgccgaggagccgggggtcagcctcgacatcgacgccgct
gcgcagaccgcgttcccgcaccggcagatcgacgcggccgaggccgaatcgatcagtcag
ggccggtggctcgagccgatcggaatcaagggtgtctacgccgccatcgatccgagcggg
cacacgatcgcgctgctccaggaacgtggacggcgggccagctcggtgatggtggtccgc
cccgcgaccctgagatag
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