Rhodococcus sp. 21391: GO592_16880
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Entry
GO592_16880 CDS
T10971
Symbol
mutM
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
rhzq Rhodococcus sp. 21391
Pathway
rhzq03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rhzq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
GO592_16880 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhzq03400
]
GO592_16880 (mutM)
Enzymes [BR:
rhzq01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
GO592_16880 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
GO592_16880 (mutM)
DNA repair and recombination proteins [BR:
rhzq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
GO592_16880 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
TackOD1
NFACT_N
Anti-TRAP
Zn_ribbon_IS1595
Zn_ribbon_TFIIB
Motif
Other DBs
NCBI-ProteinID:
QQZ17620
LinkDB
All DBs
Position
complement(3617495..3618373)
Genome browser
AA seq
292 aa
AA seq
DB search
MPELPEVEVVRRGLERHIVGASIDSVDILHPRAIRRHLPGAADLAGQLTGERIASADRRG
KYLWLVLEPSTVALVVHLGMSGQMLVQPPELPTEKHLRIRARLDSGLDLRFVDQRTFGGW
ALAPLVDVDGSLVPDSVAHIARDPLDPRFDLAATVKVVRGKHTEIKRALLDQTVVSGIGN
IYADEALWRAQIHGNRLTDRVSGPKVRELLTAAREVMREALTQGGTSFDALYVNVNGESG
YFDRSLSAYGQEDRPCPRCGTAIRREKFMNRSSFSCPKCQPAPRRSPAKSSV
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
gtgcctgaactacccgaagtcgaggtggtccggcgcggactcgaacgccacatcgtgggg
gcgtcgatcgattccgtcgacatcctgcacccgcgggcgatccggcgtcatctgcccggc
gccgccgacctcgccggacagctcaccggcgaacgcatcgcgagcgccgaccgtcgtgga
aagtatctgtggctggtcctcgaacccagcacggtcgctctcgtggtgcatctcggcatg
agtggtcaaatgctcgtgcagccaccggaattgccgaccgagaagcatctgcgcatccgt
gcccggctcgattccggtctcgacctccggttcgtcgaccagcggacgttcgggggctgg
gcgctggcaccgctcgtcgacgtcgacggctcgctcgtgccggactcggtggcgcacatc
gcccgtgacccactggatccgcggttcgacctcgcggcgaccgtgaaggtcgtgcgcggc
aagcacaccgagatcaagcgtgcgcttctcgaccagaccgtcgtctccggcatcggcaac
atctacgcggacgaggcgctgtggcgcgcacagatccacggaaatcggctcactgacagg
gtgagtggtcccaaggtccgtgaactgctcacggccgcccgggaggtcatgcgtgaggca
ctcacgcagggcggcacgtccttcgacgcgctctacgtgaacgtcaacggcgagtcgggc
tatttcgaccgttcgctgtccgcctacggtcaggaggatcgcccgtgcccgcggtgcggc
accgcgatccggcgggagaaattcatgaaccgctcgtcgttcagttgcccgaagtgccag
ccggcaccacggagaagcccggcgaaatcgtctgtgtga
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