Rhodococcus sp. 21391: GO592_18425
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Entry
GO592_18425 CDS
T10971
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
rhzq Rhodococcus sp. 21391
Pathway
rhzq03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rhzq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
GO592_18425 (xth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhzq03400
]
GO592_18425 (xth)
Enzymes [BR:
rhzq01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
GO592_18425 (xth)
DNA repair and recombination proteins [BR:
rhzq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
GO592_18425 (xth)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Prok-RING_2
COMM_domain
Motif
Other DBs
NCBI-ProteinID:
QQZ11815
LinkDB
All DBs
Position
complement(3938510..3939316)
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AA seq
268 aa
AA seq
DB search
MPHIITTVNVNGVRAAARKGLTEWIERTEADVVCLQETRASDEQLAETLAPALEGGWNLV
SAEPSSKGRNGVAILSRKPADAFRVGHGDDEFATAGRYLEADFDDLTVASLYLPSGEAQT
PRQEEKERFMDSFARYLTDTAAAAVAAGRHVVVCGDWNIAHTELDLKNWKTNKKNSGFLP
NEREWLGALFAEDAHWADVVRQLNPDVAGPYSWWSYRGKAFDNDSGWRIDYQIATRELAE
RAKQAVVERAETYDQRWSDHAPVTVQYR
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
gtgccacacatcatcaccaccgtcaatgtcaacggcgtgcgcgccgccgcccgcaagggg
ctcaccgagtggatcgagcgcacggaggccgacgtcgtctgcctgcaggagacgcgggcg
tccgacgagcaactggccgagacgctcgcgcccgccctggagggcggatggaacctggtg
tccgcggagccgtcgtcgaaggggcgcaacggcgtcgcgatcctgtcccggaaacctgcc
gacgccttccgcgtcggccacggtgacgacgagttcgcgaccgcgggccgctacctcgag
gccgacttcgacgacctgaccgtggcgagcctgtacctgccctccggggaggctcagaca
ccccggcaggaggagaaggagcggttcatggactccttcgcccggtacctcaccgacacc
gcagcggctgccgtcgcggcgggccggcacgtcgtggtctgcggcgactggaacatcgcc
cacaccgaactcgacctgaagaactggaagaccaacaagaagaactccggttttctcccg
aacgagcgggagtggctcggggccctgttcgccgaagacgcgcactgggccgacgtggtc
cggcagctgaatcccgacgtcgccggaccgtactcgtggtggtcgtaccgcgggaaggcg
ttcgacaacgactccggctggcgcatcgactaccagatcgccacccgggaactggcggag
cgggccaagcaggccgtcgtcgagcgcgccgaaacctacgaccagcggtggtccgaccac
gcgccggtcaccgtccagtaccggtga
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