Rhodococcus sp. 21391: GO592_24090
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Entry
GO592_24090 CDS
T10971
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
rhzq Rhodococcus sp. 21391
Pathway
rhzq03030
DNA replication
rhzq03430
Mismatch repair
rhzq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rhzq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GO592_24090
03430 Mismatch repair
GO592_24090
03440 Homologous recombination
GO592_24090
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rhzq03032
]
GO592_24090
03400 DNA repair and recombination proteins [BR:
rhzq03400
]
GO592_24090
Enzymes [BR:
rhzq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GO592_24090
DNA replication proteins [BR:
rhzq03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
GO592_24090
DNA repair and recombination proteins [BR:
rhzq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
GO592_24090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DEDDh_C
Motif
Other DBs
NCBI-ProteinID:
QQZ12829
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All DBs
Position
5189103..5189798
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AA seq
231 aa
AA seq
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MTSWSDRPICAFDLETTGPDPTDARIVSACIAVVDAHHFESRTWLLDPEVPIPQGASDVH
GISTEYARAHGQDYATGYGEIREALHDAWTRDHAVVAFNASYDLTVMHTEGLRLGLTELV
TGIVVDPYVIDREMDRYRKGRRTLGAVCEHYGIALEDAHEAEADAIAAAHLARTLAQEYP
NLRALDIMSHQAGWHAERQRDFADYLARQGRDASDVNGEWPIRGLAQFRIA
NT seq
696 nt
NT seq
+upstream
nt +downstream
nt
atgaccagctggtcggacagaccgatctgcgcgttcgacctggagacgacgggacccgac
cccaccgacgcccgcatcgtctccgcgtgcatcgccgtcgtcgacgctcaccacttcgag
tcgcggacctggctgctcgacccggaggttcccatcccgcagggcgcctcggacgtgcac
ggaatctccacggagtacgcccgggctcacggacaggactacgccaccgggtacggcgag
atccgcgaggctctgcacgacgcgtggacccgcgaccatgccgtcgtcgcgttcaacgcc
tcctacgacctgaccgtcatgcacaccgagggcctgcgcctcgggctgaccgaactcgtc
accggcatcgtggtcgacccctacgtcatcgaccgcgaaatggaccgataccggaagggc
aggcgcactctcggcgcggtgtgcgagcactacggcatcgcgctggaggacgcccacgag
gccgaggccgacgcgatcgccgccgcgcacctcgcccggacgctcgcgcaggagtatccg
aatctgcgggccctggacatcatgagccatcaggccggctggcacgcggaacggcaacgc
gacttcgccgactacctcgcccggcagggccgcgacgcatcggacgtcaacggcgagtgg
ccgattcgcggtctcgcacagttccgcatcgcctga
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