Rathayibacter iranicus: C7V51_03325
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Entry
C7V51_03325 CDS
T05878
Name
(GenBank) type IV secretion protein Rhs
Organism
ria
Rathayibacter iranicus
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
DUF6531
TEN_YD-shell
DR2241
Motif
Other DBs
NCBI-ProteinID:
AZZ55025
UniProt:
A0AAD1ADF7
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All DBs
Position
699619..704319
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AA seq
1566 aa
AA seq
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MGGGTSSARPDDLRAFADTSSVANDDLRDRPARLRALVTDFTDRCRWGHMDAEGVVAGFT
SWLAANDQDVVWARSIADAFTAAGGDGVVSTVADSALAVAVAAAGVTLSREDLTIGAAQV
FGAAPTSGYADDPVNTSTGNFLDTEVDLGFPGGAGSLRLERTYNSLDLSEGAFGPGWSSV
TEVRLRVGDDGATLVLPDGRELLFPRQGDGWDRAVGENRWLTREIDPERAGERLVVSGND
GSRWLFTAAGRWLSAGSGPGTRVDVEYDGDGALSRLVHERGRWVAVEWSGGRVVVAAASD
GRRVEYEYDEGRLVAVSGPGGTRRYGWNADGLLESVTDAAGVLEVRNTFDARRRVRTQTS
PFGRTTRYAYLPGRATVVSDTDGSRSNTWISDTRGRLVGVVDPLGRRQSMSYDAAGNLLA
ATGRDGTITAHAYDSRGRRTRTKTASGANITRTYDEFDRVVTVVAEQDSITRYEYADETA
RSPSVVIDPEGGRTLLTWDAGLLIEVTDPEGVTVRLGYDSFGDLVTTTDADGNTARLLRD
EAGRVVAAVSPSGARTEYRYTPTGQLASRRNPLGATWRYEYDGGGRLTGIIDPLGARTVM
EHGEHGAVSRTIDPLGRVIGREFDDLGNVSAAILPDGTSWQFGYDALSRLTETTDPAGHL
WRREYDADGGLSALIDPTGMRASVFTDPRTTAVSDGTVSSRTRFDPLGRPVATEAQDGST
ALTVYDRCGRPVELVDEEGALTRLTRDAAGRIIEQTIPSGATTRFEYDRCGRLTAITDPA
GARTTLEYDADGRHTRWTGPTGDTGWSEYDAAGRVTARHSPGRGTARYRYDLLGRLVWSR
DSWHGTRRYRYDPAGQLIEAVNGVGGVTRYEYDERGRNTTIIDPLGGITRRVFDAADHAV
AATDPLGRTTTAGYDPAGRQLWQQNPDGHRLSWTYDTSGRETSLSADGRLLSETRRDLSA
RQAVITDHTAPDGPIEHTLAWNRRDQLIRRTRNGHGLAWEYDADGNRTAMVGPDGARTRY
ERDSTGRVTAIEHPSLGRASFEYDAAGHLIASTAGGITQSWRHHDGYVTEHTTQTGSGTG
SGAGRTRVIRDEDGRITRLDGPTGSVEYRYDHAQQLLETRTNTGTNAGAGTGASTFEYDA
GGRLTRETGPDGRTSVHEYDAAGQLLATTRDDGSRIEYRYDGLGRRTHVTAADGSHRSYA
WSPAGWLNTITDTTPHGTTTTALHVDTLGELASINGATTWWDTASYAPALLAVGETPILA
TPGGVTGIGDTWTGGSWRAERATNADDLWGVGPDTGLPPGITLPAGISITGSGGLAIAGL
EWLGHRAYDPGTRGFLTVDPLDPVIGAGWSGNPYSYAGNDPLHALDPTGLRPVTDAELQA
YRNGNNGAFAAAGDWLSNNWEYVAAAAMVAIGVGLMFTGVGTLAGMALAGAASGAFLAGG
MSVATQKAVNGGVDWGQVGIDTAVGALGGGAGGAAEFLAYRAGAGAFKAEVIAGTADGGV
SGAAQYLTSPGPTPPTASSAPPPAEQQEAPPEEPPADSVAPPPAASTKQRTNYSTKYQRY
HDSPKT
NT seq
4701 nt
NT seq
+upstream
nt +downstream
nt
atgggtggggggacgtcgtcggcgcggccggatgatctgcgggcgttcgcggatacgtcg
tcggtggcgaatgatgacctgcgggatcgtccggcgcgcctgcgggcgttggtgacggat
ttcacggaccggtgccggtgggggcacatggacgcggagggggtggtggcggggttcacg
tcgtggttggcggcgaatgatcaggacgtggtctgggcgcggagcatcgcggacgcgttt
acggctgcgggcggtgacggggtcgtgtctaccgtcgcggatagcgcgttggcggtcgcg
gtggcggccgcgggtgtgaccttgtcgcgggaggatttgacgattggtgcggcgcaggtg
tttggggcggcgccgacgtcggggtatgcggatgacccggtgaatacgtccacggggaac
ttcctcgacacggaagtcgatctcgggttccccggtggtgcggggtcgttgcggctggag
cgcacctacaactccctcgacctgagcgagggcgcgttcgggccgggctggtcctcggtg
accgaagtgcgcctgcgggttggggacgacggcgcgactctcgtcctccccgacggccgg
gagctgctgttcccccggcagggcgacggctgggaccgcgcggtgggcgagaaccggtgg
ctgacccgggagatcgacccggagcgcgcgggtgagcgtcttgtggtgtccgggaatgac
gggtcgaggtggctgttcaccgcggccggccggtggttgtccgcggggagtggtccgggg
acgcgggtggacgtcgagtacgacggcgacggtgccctgtcccggctggtgcatgagcgg
ggccggtgggtcgctgtggagtggtcgggcggccgggtggttgttgcggcggcgtcggat
ggtcgccgggtggagtacgagtacgacgagggccgcctggtcgcggtgtcggggccgggt
gggacgcgccggtacgggtggaacgcggacgggctgctggagtcggtgacggatgcggcc
ggggtgctcgaggttcggaacacgttcgacgcgcggcggcgagtgcgcacgcagacgtcg
ccgtttgggcggacgacccggtatgcgtatctccctggccgggcgacggtcgtgtcggac
acggacgggtcgcggtcgaatacgtggatttcggacactcggggtcgtctggtgggggtg
gtggatccgttggggcggcggcagtcgatgagttacgacgctgccgggaacctgctcgcc
gcgaccggccgcgacggcacgatcaccgcgcacgcctatgactctcgcgggcgccgcacc
cgcacgaagacggcgtccggcgcgaacatcacccgcacgtatgacgagttcgaccgggtg
gttaccgtcgtcgccgagcaggacagcatcacccgctatgagtatgcggatgagacggcg
cggtcgccgagtgtcgtgatcgacccggaaggcggccgcaccctcctcacctgggatgcg
gggctgctgatcgaggtcaccgacccggaaggcgtgacggtccgtctgggctacgactcc
ttcggggacttggtgaccaccacggacgccgacgggaacactgcccggctgctgcgggat
gaggcgggccgggtggtcgcggcggtgtcgccgtcgggcgcgcggaccgagtaccgctac
accccgaccggacagctcgcttcccgccggaacccgctcggcgcgacgtggcggtatgag
tacgacggcggcggacgcctgaccgggatcatcgaccccctcggcgcccggaccgtgatg
gagcacggggagcacggcgccgtgtcccggaccatcgaccctttgggtcgggtgatcggc
cgggagttcgatgacctcggcaacgtgtccgccgcgatcctccccgacgggacatcgtgg
cagttcgggtacgacgccctgtcccgcctcaccgagaccacggatcccgcggggcatttg
tggcgtcgcgagtacgacgcggacggcggcctgagtgccctgatcgacccgacggggatg
cgggcgagtgtgttcaccgatccgcgcacgacggccgtctccgacgggacggtgtcctcc
cgcacccgcttcgaccccctcggccggcccgtcgccactgaagcgcaggacgggtccacg
gcgctcaccgtgtatgaccggtgcgggcgccccgtggaactcgtcgacgaggaaggagcc
ctcacccgcctcacccgcgacgccgccgggcgcatcatcgaacagaccatcccctccggc
gcgaccacccgatttgagtacgaccggtgcggacgcctcaccgcgatcaccgacccggcc
ggcgcccgcaccaccctcgagtacgacgccgacggacgccacacccgatggaccggaccc
accggagacaccggctggagcgaatacgacgcggccggccgcgtcaccgcccgccacagc
cccggtcgcgggacggcccggtaccggtacgacctgctcgggcgcctcgtgtggtcgcgg
gactcctggcacgggacccgccgataccggtacgaccccgccgggcaactcatcgaagcg
gtcaacggggtcggcggagtcacccggtacgagtacgacgagcgcggccgcaacacgacc
atcatcgacccgctcggcgggatcacccggcgagtgttcgacgcggccgaccatgcggtc
gcggcgaccgatccactcggccggaccacgaccgccggttacgacccggcgggacgtcaa
ctgtggcagcagaaccccgacgggcaccgcctgtcctggacctacgacacgtctggccgc
gaaaccagcctcagcgccgacggacgcctgctctccgaaacccgccgcgacctatcagcc
cgccaggcagtcatcaccgaccacaccgcacccgacggacccatcgaacacacgctcgcc
tggaaccgccgggaccagctcatccgccgcacccgcaacggccacggcctcgcgtgggag
tacgacgccgacggaaaccggaccgccatggtggggccggatggggcgcggacccggtat
gaacgcgacagcaccgggcgggtcaccgcgatcgaacaccccagcctgggccgcgcgagc
ttcgagtacgacgccgccggacacctcatcgcgtccaccgccggcggcatcacccagtcc
tggcgacaccacgacgggtacgtcaccgaacacaccacccagaccggcagcgggaccggc
agcggggcggggcggacgcgggtgatccgggatgaggacggccgcatcacccgcctcgac
ggacccaccggcagcgtcgaataccggtacgaccacgcccagcaactcctcgaaacccgc
accaacacgggcaccaacgcgggcgcgggcaccggtgcgtcgacgttcgagtacgacgct
ggcggacgcctcacccgcgaaaccggccccgacggccgcacgagcgtccacgaatacgac
gccgccgggcaactgcttgccaccactcgggatgacggctcccggatcgagtaccgctac
gacggcctcggccgccgcacccacgtcaccgccgccgacggcagccaccgctcctacgcc
tggagccccgccggctggctcaacaccatcaccgacaccaccccacacggcaccaccacg
accgccctgcacgtcgataccctcggcgaactcgccagcatcaacggggctaccacctgg
tgggacaccgcctcctacgcccccgcactcctcgccgtgggcgagactccgatccttgcc
acgccgggaggcgtcaccggcatcggcgacacctggaccggcggcagctggcgggccgaa
cgcgcgaccaacgccgacgacctctggggcgtcggccccgataccggactgccgcccggc
atcaccctccccgccgggatcagcatcaccgggtccggtggcctcgccatcgcgggactg
gaatggctcggccaccgcgcctacgacccggggacccggggtttcctcacggtggatccc
ctcgacccggtgatcggtgcgggctggtccgggaacccgtattcgtacgccgggaacgac
cccctccacgccctggaccccaccggactgcggcccgtgaccgacgcggagctccaggcc
taccgcaacgggaacaacggcgcattcgccgccgccggcgactggctctcgaacaactgg
gaatacgttgccgcggctgccatggtcgcgatcggtgtcggcctgatgttcaccggtgtg
ggcaccctcgccgggatggccctcgctggggccgcatccggcgcgttcctggctggcggg
atgtccgtcgcgacccagaaagcggtcaacggtggcgtcgactggggccaagtcggcatc
gacaccgccgtcggagccctcggcggcggcgccggaggcgcagccgagttcctcgcctac
cgcgccggcgccggcgccttcaaggccgaagtcatcgccggcaccgccgacggcggagtc
tccggcgccgcccaatacctcaccagccccggacccacacccccgacggcctcctcggcg
ccaccgccggcggagcagcaggaggcgccgccggaggagccgccagcggactcggtggcg
ccgccgcccgccgcctcgacaaaacagcggacaaactactcgacgaaataccagcggtac
cacgactcccccaagacatga
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